Gene Information

Name : TtJL18_1018 (TtJL18_1018)
Accession : YP_006058703.1
Strain : Thermus thermophilus JL-18
Genome accession: NC_017587
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 930338 - 931816 bp
Length : 1479 bp
Strand : +
Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial

DNA sequence :
ATGAACGACCAGACCCGCCAGCGCCTGCTCAACCTGGAAGCCTTGGTGGAGGCGGGGTTTGCCCCCTACCCCTACCGCTT
CCCCAAGACCCATAGCGCCGAGGCCATCCTGAAGGCCAAGCGGGGTGCTCCCCCTGAGTCCGAGTGGCCGGAGGAGGAGG
TGGCCGTGGCCGGGCGCCTCGTGGCCTTGAGGCGCATGGGCAAGGTGACCTTCGCCCACCTCCTGGACGAGACGGGAAGG
ATCCAGCTCTACTTCCAGAGGGACCTCACGCCCAAGTACGAGCTCCTCAAGAAGCTGGACGTGGGGGACATCCTGGGGGT
GAGGGGGCACCCCTTCACCACCAAGACGGGGGAGGTGACGGTCAAGGTCCTGGACTGGACGCCCCTGGTCAAGAGCCTCC
ACCCCCTCCCCGACAAGTGGCACGGCCTCCGGGACAAGGAGGTCCGCTACCGCCAGCGCTATCTGGACCTCATCGTCAAC
CCCGAGGTGCGGGAGGTCTTCCGCCGCCGCTCGGAGATCGTCCGCTACATCCGGCGCTTCTTTGAGGCCAAGGGGTTTTT
GGAGGTGGAGACCCCCATCCTCCAGCCCACCACGGGCGGGGCGGAGGCCAGGCCTTTCAAGACCTACCACAACGCCCTAG
ACCACGAGTTTTACCTCCGTATCTCCTTGGAGCTCTACCTCAAGCGCCTCCTCGTCGGGGGGTACGAGAAGGTCTTTGAG
ATCGGGCGCAACTTCCGCAACGAGGGGATTGACCACAACCACAACCCCGAGTTCACCATGCTGGAGGCCTACTGGGCCTA
CGCCGACTACCAGGACATGGCCGGCCTGGTGGAAGAGCTCCTTTCGGGCCTCGTCCTCCACCTCTTCGGGAGCTACGAGG
TCCCCTACCAGGGGCGGGTGCTGAACTTCAAGCCGCCCTTCAGGCGCATCTCCTTCGTGGAGGCCCTGAAGGAGAAAGCG
GGCCTTCCCTTTGACCCCCTGGACCTGGAGCGCCTAAGGCTCTGGGCCGACGCCCACCACCCCGAGCTTTCCCAGGTGCC
GAACTATAAGCTTCTGGACAAGCTTTTCGGCATCTACGTGGAGCCCGAGCTCCAGGACCCCACCTTTGTCTTTGACTTCC
CCCTGGCCATCAGCCCCCTGGCCAAAAGGCACCGGGAGAAGCCGGGCCTCGTGGAGCGCTGGGACCTCTACGCCGGGGGG
ATGGAGCTTGCCCCCTGTTACTCCGAGCTCAACGACCCCTTGGACCAGAGGGAGCGCTTCCTGGAGCAGGCGAGGCGCCG
CAAGGAGGGGGACGAGGAGGCCCCCGAGCCCGACGAGGACTTCCTCCTGGCCCTGGAGTACGGGATGCCTCCGGCGGCGG
GCCTGGGCCTCGGGATAGACCGCCTCGCCATGCTCCTCACCGACCAGCCCTCTCTAAGGGACGTCCTCCTCTTCCCCCTC
CTCAAGCCCAAGAAGGAGGCGGTGGAAGAAGGGGTTTAG

Protein sequence :
MNDQTRQRLLNLEALVEAGFAPYPYRFPKTHSAEAILKAKRGAPPESEWPEEEVAVAGRLVALRRMGKVTFAHLLDETGR
IQLYFQRDLTPKYELLKKLDVGDILGVRGHPFTTKTGEVTVKVLDWTPLVKSLHPLPDKWHGLRDKEVRYRQRYLDLIVN
PEVREVFRRRSEIVRYIRRFFEAKGFLEVETPILQPTTGGAEARPFKTYHNALDHEFYLRISLELYLKRLLVGGYEKVFE
IGRNFRNEGIDHNHNPEFTMLEAYWAYADYQDMAGLVEELLSGLVLHLFGSYEVPYQGRVLNFKPPFRRISFVEALKEKA
GLPFDPLDLERLRLWADAHHPELSQVPNYKLLDKLFGIYVEPELQDPTFVFDFPLAISPLAKRHREKPGLVERWDLYAGG
MELAPCYSELNDPLDQRERFLEQARRRKEGDEEAPEPDEDFLLALEYGMPPAAGLGLGIDRLAMLLTDQPSLRDVLLFPL
LKPKKEAVEEGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 4e-82 45
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 8e-66 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TtJL18_1018 YP_006058703.1 lysyl-tRNA synthetase VFG1668 Protein 2e-82 45