Gene Information

Name : SCATT_06490 (SCATT_06490)
Accession : YP_006052542.1
Strain : Streptomyces cattleya NRRL 8057
Genome accession: NC_017586
Putative virulence/resistance : Virulence
Product : Clp protease ATP binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 724686 - 727223 bp
Length : 2538 bp
Strand : +
Note : -

DNA sequence :
ATGAGCAGCGGGTTCATGGGTCCGCAGGGCTACGGTCCGGACCCGTTCGGAGAGTTCTTCGCACGCTTCTTCGGCGGCGG
GCCCCGGCCGGGATCACGGCAGATCGACATCGGACGGCTGATGAGCGAGCCGGCCCGGCAACTGGTGGCCGACGCCGCCA
GTTACGCCGCCGAGCACGGCAGCAGTGACCTGGACACCGAGCATCTGCTGCGCGCGGCGCTGACCACCGAGCCCACCCGC
AGTCTGGTGGCGCGCTCGGGCGCCGACCCGGACCGGATCGCCGCCGACATCGACAGCCGGGCCGGGGCCGGGCCGCCGAA
GGACTCGCTGGCCGTCACCCCGGCGGTCAAGCGAGCACTGCTGGACGCCGCCGACCTGGCCCGGTCCGCCGGCTCCTCGT
ACATCGGGCCCGAGCACGTGCTGCGGGCGCTGGCGGCCAACCCCGACTCGGCGGCCGGGCACATCCTGGGCTCCGCCCAC
TTCGACGCGCGCGGTGCCCGGCCGGGCCCGCCGGGGCAGCCCCCGCAGGGCGCCGGCTGGCCGGGCGGCGAGGCCGGCGC
ACCCGCGCCCCGGCACGACACGCCCAACCTCGACCGGTTCGGCCGGGACCTGACCGAGCTGGCCCGGGCCGGCCGGATCG
ACCCGGTGATCGGCCGCGAGGAGGAGATCGAGCAGACCATCGAGGTGCTCTCCCGGCGCGGCAAGAACAACCCGGTGCTC
ATCGGGGACGCCGGCGTCGGCAAGACCGCCATCGTCGAGGGGCTGGCCCAGCGCATCGCCGACGGCGAGGTGCCCGACAC
CCTGCTGGGCCGCCGGGTGGTCTCCCTGGACCTGTCCGGTGTGGTGGCCGGCACCCGTTACCGCGGTGACTTCGAGGAGC
GGCTCAACGGGATCGTCGAGGAGATCCGGACGCACTCCGGTGAGGTGATCGTCTTCATCGACGAGCTGCACACCGTGGTG
GGCGCCGGTGGCGGGGGCACCGAGGGCGGCTCGATGGACGCCGGCAACATCCTCAAGCCGCCGCTCTCCCGTGGCGAGCT
GCACGTCATCGGGGCCACCACGCTGGAGGAGTACCGGCGCTACATCGAGAAGGACGCGGCGCTGGCCCGCCGGTTCCAGC
CCATCCTGGTGCCCGAGCCGACCACCGCCGACACCCTGGAGATCCTGCGCGGCCTGTCCGACCGGTACGAGGCCCACCAC
CAGGTGCGCTACACCGACCAGGCGCTGGTGGCCGCGGTGGAGCTGTCCGATCGCTACCTCACCGACCGCTTCCTGCCCGA
CAAGGCCATCGACCTGATGGACCAGGCCGGCGCCCGGGTGCAGTTGCGTACCCACACCAAGGGCACCGATGTGCGGGCGC
TGGAGCGGCAGTTGGAGCAGCTGACCCGGGACAAGGACCAGGCGGTGGCGGCCGAGTCCTACGAGCGGGCCACCGAGCTG
CGCGACCGGATCACCGAGCTGAACCGCCGGATCGACGCGGCCCGGGAAGGCAGCCAGGGCGAGGAGCACGGCGACGGGAA
GGTGGTCGAGGTCACCGCGGAGGACATCGCCGAGGTGGTCTCCCGGCAGACCGGCATCCCGGTCAAGAGCCTCACCGAGG
AGGAGCGCGACCGGCTGCTGGGCCTGGAGGAGCATCTGCACCAGCGGGTGATCGGGCAGGACGAGGCGGTCACCGCGGTC
GCCGACGCGGTGCTGCGTTCCCGGGCCGGACTGGCCGACCCCAACCGTCCGATCGGCAGCTTCCTGTTCCTCGGCCCCAC
CGGGGTGGGCAAGACCGAGCTGGCCCGGGCGCTGGCCGAGGCGCTCTTCGGCAGCGAGGACCGGATGGTGCGGCTGGACA
TGAGCGAATACCAGGAACGCCACACGGTCAGCCGGCTGGTGGGCGCCCCGCCCGGTTACGTCGGCCACGACGAGGCCGGA
CAGCTCACCGAGGCGGTCCGCCGCCACCCCTACTCGCTGGTGCTGCTGGACGAGGTGGAAAAAGCCCACCCCGATGTCTT
CAACACCCTGCTCCAGGTGCTGGACGACGGACGGCTGACCGACGCGCAGGGCCGTACCGTCGACTTCAAGAACACGGTCG
TGGTGATGACCAGCAACCTCGGTTCGGAGACGGCCGGCGGTCCGGCGCTGGGCTTCGGCGCGGGGGCCGGCGGCGACGAC
GAGGAGAGGGAGCGGACGCTGCGCCCGCTGCGGCAGCACTTCCGCCCGGAGTTCCTCAACCGCATCGACGAGATCGTGGT
CTTCCGCCGGCTCACCGACGACCAGCTGCGGCAGATCACCGATCTGCTGCTGGAGGAGACCCGGCGGCGGCTGCACGCCC
AGGGGGTGGCGGTGGACTTCTCCCCGGCGGCGGTGGACTGGCTGGCCCGCCGCGGCCACCAGCCCGAGTACGGTGCCCGG
CCGCTGCGCCGCACCATCCAGCGCGAGATCGACCGGCCGCTGTCGCGGTTGCTGCTGGACGGCAAGGTGCCCTCCGGCTC
GCGGGTGCGGGTGGAGGTCGAGGACGACCGGCCGGCGTTCCGTACCGGCCGGGGCTGA

Protein sequence :
MSSGFMGPQGYGPDPFGEFFARFFGGGPRPGSRQIDIGRLMSEPARQLVADAASYAAEHGSSDLDTEHLLRAALTTEPTR
SLVARSGADPDRIAADIDSRAGAGPPKDSLAVTPAVKRALLDAADLARSAGSSYIGPEHVLRALAANPDSAAGHILGSAH
FDARGARPGPPGQPPQGAGWPGGEAGAPAPRHDTPNLDRFGRDLTELARAGRIDPVIGREEEIEQTIEVLSRRGKNNPVL
IGDAGVGKTAIVEGLAQRIADGEVPDTLLGRRVVSLDLSGVVAGTRYRGDFEERLNGIVEEIRTHSGEVIVFIDELHTVV
GAGGGGTEGGSMDAGNILKPPLSRGELHVIGATTLEEYRRYIEKDAALARRFQPILVPEPTTADTLEILRGLSDRYEAHH
QVRYTDQALVAAVELSDRYLTDRFLPDKAIDLMDQAGARVQLRTHTKGTDVRALERQLEQLTRDKDQAVAAESYERATEL
RDRITELNRRIDAAREGSQGEEHGDGKVVEVTAEDIAEVVSRQTGIPVKSLTEEERDRLLGLEEHLHQRVIGQDEAVTAV
ADAVLRSRAGLADPNRPIGSFLFLGPTGVGKTELARALAEALFGSEDRMVRLDMSEYQERHTVSRLVGAPPGYVGHDEAG
QLTEAVRRHPYSLVLLDEVEKAHPDVFNTLLQVLDDGRLTDAQGRTVDFKNTVVVMTSNLGSETAGGPALGFGAGAGGDD
EERERTLRPLRQHFRPEFLNRIDEIVVFRRLTDDQLRQITDLLLEETRRRLHAQGVAVDFSPAAVDWLARRGHQPEYGAR
PLRRTIQREIDRPLSRLLLDGKVPSGSRVRVEVEDDRPAFRTGRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 5e-158 54
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 4e-93 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCATT_06490 YP_006052542.1 Clp protease ATP binding subunit VFG0079 Protein 2e-173 51
SCATT_06490 YP_006052542.1 Clp protease ATP binding subunit VFG0080 Protein 2e-145 51