Gene Information

Name : SCATT_38870 (SCATT_38870)
Accession : YP_006055780.1
Strain : Streptomyces cattleya NRRL 8057
Genome accession: NC_017586
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4177237 - 4177917 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence : 
ATGACCGCACCGCTGCTGCGCGCCACCGCGCTGGCCAAGTCCTACGGCCCCACCCGGGCGCTGGAGAACGCGGAGTTCTC
CCTCCGCGCCGGTGAGGTGGTCGCCGTGATGGGCCCCTCCGGCTCCGGCAAGTCCACGCTGTTGCACTGCCTGGCCGGGA
TCGTCCGCCCCGACGCCGGCCAGGTCTTCTACCGCGACCGGGAGCTGTCCGCGATGAGCGACGGCCAACGCAGCGCGCTG
CGCCGCGGGGAGTTCGGCTTCGTCTTCCAATTCGGCCAGCTCGTCCCGGAGTTGACCTGCCTGGAGAACGTGGCGCTACC
GCTGCGGCTGGCCGGGACCGGGCGCCGGGCCGCCGAGGAACGCTCCCGCGAGTGGCTGGCCCGGCTGGAGGTCGAGCAGG
TGACCGCCAAGCGCCCCGGCGAGGTCTCCGGCGGCCAGGGCCAGCGGGTCGCGGTGGCCAGGGCGCTGGTCACCGGCCCC
CGGCTGCTCTTCGCCGACGAACCCACCGGCGCCCTCGACTCGCTCAACGGAGAACGCGTGATGGGACTGCTGACCGCCGC
CGCCCGGGAGAACGGCACCGCCGTCGTCCTGGTCACCCACGAGGCCCGGGTCGCCGCGTACTCCGACCGCGAGGTCGTGG
TGCGCGACGGCCGCTGCCGGGATCTGGAGCCGGCCGCATGA

Protein sequence : 
MTAPLLRATALAKSYGPTRALENAEFSLRAGEVVAVMGPSGSGKSTLLHCLAGIVRPDAGQVFYRDRELSAMSDGQRSAL
RRGEFGFVFQFGQLVPELTCLENVALPLRLAGTGRRAAEERSREWLARLEVEQVTAKRPGEVSGGQGQRVAVARALVTGP
RLLFADEPTGALDSLNGERVMGLLTAAARENGTAVVLVTHEARVAAYSDREVVVRDGRCRDLEPAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-29 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCATT_38870 YP_006055780.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-28 45
SCATT_38870 YP_006055780.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-36 42
SCATT_38870 YP_006055780.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 5e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCATT_38870 YP_006055780.1 ABC transporter ATP-binding protein VFG2059 Protein 2e-22 43