Gene Information

Name : SCATT_26010 (SCATT_26010)
Accession : YP_006054494.1
Strain : Streptomyces cattleya NRRL 8057
Genome accession: NC_017586
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2743137 - 2745668 bp
Length : 2532 bp
Strand : -
Note : -

DNA sequence :
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACCGAGCACATCCTCCTGGGTCTGATCCACGAGGGTGAGGGTGTCGCCGCTAAGGCCCTGGAGAGCCTCGGCA
TTTCGCTTGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGCCAGGGCCAGCAGGCCCCGTCCGGCCACATCCCCTTC
ACCCCTCGTGCCAAGAAGGTCCTGGAGCTGTCGCTCCGTGAGGCCCTCCAGCTCGGCCACAACTACATCGGTACGGAGCA
CATCCTGCTCGGCCTGATCCGCGAGGGTGAGGGCGTGGCCGCGCAGGTGCTGGTGAAGCTTGGCGCCGACCTCAACCGGG
TGCGGCAGCAGGTCATCCAGCTCCTGTCGGGTTACCAGGGCGGCAAGGAGTCGGCCACGGCCGGCGGCCCCGCCGAGGGC
ACCCCGTCCACTTCCCTGGTGCTCGACCAGTTCGGCCGCAACCTGACGCAGGCCGCCCGCGAGACCAAGCTCGACCCGGT
GATCGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGTACCAAGAACAACCCCGTCCTCATCGGCG
AGCCCGGCGTCGGCAAGACCGCCGTGGTCGAGGGGCTGGCCCAGGCCATCGTCAAGGGCGAGGTCCCCGAGACGCTGAAG
GACAAGCAGCTCTACACCCTCGACCTGGGCGCCCTGGTGGCCGGCTCCCGGTACCGCGGTGACTTCGAGGAGCGCCTGAA
GAAGGTCCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTCCACACCCTGGTGGGTGCGGGCG
CCGCCGAGGGCGCGATCGACGCCGCCAGCATCCTCAAGCCGATGCTCGCCCGCGGTGAGCTCCAGACCATCGGCGCCACC
ACGCTCGACGAGTACCGCAAGCACCTGGAGAAGGACGCGGCCCTGGAGCGCCGCTTCCAGCCGATCCAGGTCGCCGAGCC
GTCGCTCCCGCACACCATCGAGATCCTCAAGGGCCTGCGGGACCGCTACGAGGCCCACCACCGCGTCTCCATCACCGACG
CGGCGCTGGTCGCGGCGGCCACCCTGGCCGACCGCTACATCTCCGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATC
GACGAGGCGGGCTCGCGGATGCGCATCCGCCGGATGACCGCCCCGCCGGACCTGCGCGAGTTCGACGAGAAGATCGCGGA
CGTGCGCCGGGAGAAGGAGTCGGCCATCGACTCCCAGGACTTCGAGAAGGCCGCGTCGCTGCGCGACAAGGAGAAGCAGC
TCCTGGCCGCGAAGACCAAGCGGGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTGGACGAGGAGCTG
ATCGCCGAGGTCCTGGCGACCGCCACCGGCATCCCGGTCTTCAAGCTCACCGAGGAGGAGTCCTCGCGTCTGCTGCGCAT
GGAGGACGAGCTCCACAAGCGCGTCATCGGGCAGAAGGACGCCATCAAGGCGCTCTCCCAGGCCATCCGGCGTACCCGGG
CCGGCCTGAAGGACCCGAAGCGTCCCGGCGGTTCGTTCATCTTCGCCGGCCCCTCCGGCGTCGGTAAGACCGAGCTGTCC
AAGACGCTGGCGGAGTTCCTCTTCGGCGACGAGGACGCGCTGATCCAGCTCGACATGTCGGAGTTCAGCGAGAAGCACAC
CGTCTCCCGGTTGTTCGGCTCGCCCCCCGGCTACGTCGGCTACGAGGAGGGCGGCCAGCTCACCGAGAAGGTGCGCCGCA
AGCCGTTCTCCGTGGTCCTCTTCGACGAGGTCGAGAAGGCCCACCCGGACATCTTCAACTCGCTGTTGCAGATCCTGGAG
GACGGTCGGCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTCATCATCATGACCACCAACCTCGGTAC
CCGGGACATCTCCAAGGGCTTCAACCTCGGCTTCGCCGCCGCGGGTGACGTCAAGACCGGGTATGAGCGGATGAAGGCCA
AGGTCGGCGAGGAGCTCAAGCAGCACTTCCGCCCCGAGTTCCTCAACCGTGTGGACGACATCGTGGTCTTCCACCAGCTC
ACCGAGGACGACATCATCCAGATCGTCGACCTGATGATCGCCCGCGTCGACGAGCGGCTGAAGGACCGGGACATGGGCAT
CGAGCTCAGCCCCGAGGCCAAGAAGCTGCTCGCCAAGAAGGGCTACGACCCGATCCTGGGCGCCCGGCCGCTGCGTCGGA
CGATCCAGCGCGAGATCGAGGACCAGCTCTCCGAGAAGATCCTCTTCAACGAACTGCGCCCCGGTCACATCGTGGTCGTC
GGCACCGAGGGCGAGGGTGAGGAGAAGAAGTTCACCTTCCGCGGTGAGGAGAAGGTGACCGTCGCCGACGCCCCGCCCAT
CGAGGCGGCCGGCAGCGGCGGCAGTGGCCCCAACCTCTCCAAGGACGTCTGA

Protein sequence :
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGGKESATAGGPAEG
TPSTSLVLDQFGRNLTQAARETKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLK
DKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT
TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDAALVAAATLADRYISDRFLPDKAIDLI
DEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDSQDFEKAASLRDKEKQLLAAKTKREKEWKAGDMDVVAEVDEEL
IAEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELS
KTLAEFLFGDEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILE
DGRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAAGDVKTGYERMKAKVGEELKQHFRPEFLNRVDDIVVFHQL
TEDDIIQIVDLMIARVDERLKDRDMGIELSPEAKKLLAKKGYDPILGARPLRRTIQREIEDQLSEKILFNELRPGHIVVV
GTEGEGEEKKFTFRGEEKVTVADAPPIEAAGSGGSGPNLSKDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 77
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 8e-94 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCATT_26010 YP_006054494.1 ATP-dependent Clp protease VFG0079 Protein 0.0 62
SCATT_26010 YP_006054494.1 ATP-dependent Clp protease VFG0080 Protein 2e-149 52