Gene Information

Name : SCATT_20550 (SCATT_20550)
Accession : YP_006053948.1
Strain : Streptomyces cattleya NRRL 8057
Genome accession: NC_017586
Putative virulence/resistance : Virulence
Product : two-component system response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2197523 - 2198194 bp
Length : 672 bp
Strand : -
Note : -

DNA sequence : 
ATGACCCGCGTACTGCTCGCCGAGGACGACGCCTCCATCTCGGAACCGCTCGCACGCGCACTGCGCCGCGAAGGATACGA
CGTGGAGGTGCGCGAAGACGGACCGACCGCGCTCGACGCCGGGCTCCAGGGCAGCGTGGACCTGCTCGTGCTGGACCTCG
GCCTGCCCGGGATGGACGGCCTGGAGGTGTGCCGCCGGCTGCGCACCGAGGGCCACGGCTTCCCGGTGCTCGTCCTCACC
GCCCGGGCCGACGAGGTGGACACGGTGGTCGGCCTCGACGCCGGCGCCGACGACTACGTCACCAAGCCCTTCCGCCTCGC
CGAACTGCTCGCCCGGGTGCGGGCCCTGCTGCGCCGCGGCAGCGCCGAGTCGCAGCCGGCCACCCAGGGCGTGCGCATCG
ACGTCGAGTCGCACCGGGCGTGGATCGGCGACGACGAACTGTCGCTGACCGCCAAGGAGTTCGACCTGCTGCGGGTCCTG
GTGCGGGACGCCGGCCGGGTGGTCACCCGCGACCAGCTGATGCGCGAGGTGTGGGACACCACCTGGTGGTCCTCGACCAA
GACGCTCGACATGCACATCTCCTGGCTGCGCAAGAAGCTCGGCGACGACGCCGCCAACCCGCGGTACATCTCCACCGTGC
GCGGCGTCGGCTTCCGCTTCGAGAAGAACTGA

Protein sequence : 
MTRVLLAEDDASISEPLARALRREGYDVEVREDGPTALDAGLQGSVDLLVLDLGLPGMDGLEVCRRLRTEGHGFPVLVLT
ARADEVDTVVGLDAGADDYVTKPFRLAELLARVRALLRRGSAESQPATQGVRIDVESHRAWIGDDELSLTAKEFDLLRVL
VRDAGRVVTRDQLMREVWDTTWWSSTKTLDMHISWLRKKLGDDAANPRYISTVRGVGFRFEKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-14 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCATT_20550 YP_006053948.1 two-component system response regulator AE000516.2.gene3505. Protein 2e-30 46
SCATT_20550 YP_006053948.1 two-component system response regulator BAC0083 Protein 2e-20 44
SCATT_20550 YP_006053948.1 two-component system response regulator BAC0197 Protein 7e-17 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCATT_20550 YP_006053948.1 two-component system response regulator VFG1390 Protein 2e-28 45
SCATT_20550 YP_006053948.1 two-component system response regulator VFG0473 Protein 1e-17 43
SCATT_20550 YP_006053948.1 two-component system response regulator VFG0596 Protein 4e-15 42
SCATT_20550 YP_006053948.1 two-component system response regulator VFG1389 Protein 2e-22 41