Gene Information

Name : SCATT_p08000 (SCATT_p08000)
Accession : YP_006050946.1
Strain :
Genome accession: NC_017585
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 796012 - 796896 bp
Length : 885 bp
Strand : +
Note : -

DNA sequence :
GTGATCGACCACCTGCGAGACAAGGGCCTCGGGGTCGATCCCGTCTGCCGGGTGCTGGGCTTGTCTCCCTCGACGTACTT
CGCGCGCAAGACGCGACCGAAGTCCGCCCGCCGGTTGCGTGATGAAGAGCTGATTCCGCTGGTCACAGCCGCGTGGGAGG
ACTCCGGCCGCACCTACGGCGCCCGCCGGGTCACCCGCGCGCTGGTCCGCGCCGGCCACGCGGTGGCCCGCTGCACGGTC
GAGCGGCTGATGCGGGAGCTCGGGATCGAGGGCGTCATCCGCGGGCAACGTCGTCGCACCACGGTCCCCGAGCCGACCGC
GCCGCGTCCGCCGGATCTGGTCAACCGGCGGTTCACCGCCGAGCGGCCGAACCAGCTGTGGTTGGCGGACCTGACCTACA
TCCGCACGTGGTCGGGCTGGGTCTACGTGGCGTTCGTCCTGGACGCGTACTCCCGCCGGATCGTGGGCTGGCAGGCCGCC
ACCCACATGCGCACGGACCTGCCGCTGGACGCACTGGAGATGGCGCTGTGGCGGCAGCAGATCAAGAAGGACGCCGGCCT
CATTCATCACAGCGACCGCGGGTCGCAATACGTGTCCATTCGCTATACGGAGCGATTGGCCGAGGCCGGCGCCTCCGCGT
CCGTGGGCTCCGTCGCCGATTCGTACGACAACGCGATGGCCGAGGCCTTGAATGGCACATTCAAGGCCGAACTGATCGAG
CATCAGGGCCCGTGGCGGGACTTCGACGAAGTCGAGCGGGCCGTCTTCCAGTGGGTCGCGTGGTACAACGGTGAACGACT
CCACTCCGCCCTCGGCTACCTGCCACCCGACGAGTACGAACAGGCGTACTGGGCGAGACCGGAGCAAGTCCCACAGACCG
CTTGA

Protein sequence :
MIDHLRDKGLGVDPVCRVLGLSPSTYFARKTRPKSARRLRDEELIPLVTAAWEDSGRTYGARRVTRALVRAGHAVARCTV
ERLMRELGIEGVIRGQRRRTTVPEPTAPRPPDLVNRRFTAERPNQLWLADLTYIRTWSGWVYVAFVLDAYSRRIVGWQAA
THMRTDLPLDALEMALWRQQIKKDAGLIHHSDRGSQYVSIRYTERLAEAGASASVGSVADSYDNAMAEALNGTFKAELIE
HQGPWRDFDEVERAVFQWVAWYNGERLHSALGYLPPDEYEQAYWARPEQVPQTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 2e-45 56
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 3e-45 55
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 4e-49 53
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 2e-53 50
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 6e-54 50
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 7e-54 50
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 5e-55 50
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-54 50
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 2e-53 50
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 2e-53 50
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 6e-55 50
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-54 50
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 6e-55 49
Z1221 NP_286756.1 transposase Not tested TAI Protein 3e-55 49
Z1198 NP_286733.1 transposase Not tested TAI Protein 2e-55 49
Z1638 NP_287141.1 transposase Not tested TAI Protein 2e-55 49
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 1e-54 49
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 4e-52 49
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 7e-55 49
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 7e-55 49
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 2e-48 47
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 4e-40 47
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 1e-36 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCATT_p08000 YP_006050946.1 hypothetical protein VFG1602 Protein 3e-52 49