Gene Information

Name : SCATT_p15960 (SCATT_p15960)
Accession : YP_006051742.1
Strain :
Genome accession: NC_017585
Putative virulence/resistance : Virulence
Product : ABC transporter related protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1655216 - 1656019 bp
Length : 804 bp
Strand : -
Note : -

DNA sequence : 
GTGCACACGTCACAGGACCTTCGCGGGGCGGAGGCGGTACGGCTGGAGGCCGTGTCGAAGTCCTACGGCCGAGGGAGCGG
CCGGGTGGCCGCGCTCCGCGGGCTCGGCATGAGCTTCGGTCACGGCACGTTCACCGCCGTGATGGGGCCGTCCGGATCCG
GCAAGAGCACCTTTCTGCACTGCGCGGCGGGGCTGGTCCGGCCCAGCTCCGGCAGGGTCACCGTCGGCGGCATCGACCTG
TCGGGCCTGGACGACGCCGAGTTGACCAGGTTGCGCCGGGATCGGATCGGCTTCGTCTTCCAGTCCTTCAACCTGCTGCC
GGCGCTGACGGTCAGTCAGAACATCGCGTTGCCGCTGCGGCTGGCCGGGCAGCGTCCGGACGAGGGTCTGGTCCGCGCCG
TCGTGCGGCGGGTGGGCCTGTCCGAGCGGATCGGTCATCTGCCGGCGCAGTTGTCCGGCGGGCAGCAGCAGCGCGTGGCC
ATCGCCCGTGCCCTGGTGACCCGTCCGACCGTCGTCTTCGCCGACGAACCCACCGGTGCCCTCGACACCCGGGCCGCCGC
GTCCGTCCTCACCCTGCTGCGCGAGTCCGTGGACACCGCGGGTCGGACGCTGGTCATGGTCACCCATGACCCGGTCGCCG
CCTCCTACGCCGACCGTGTGGTCTTCCTCGCCGACGGTGCCTTCGCCGGCGAACTGCACCGGCCGACCGCCGACGCGGTG
GCCGCCCGGATGACCCGGCTCGGCGCCTGGGAGGACGAGCCCCGGCACCGCAGCATGCCGCAGGCCCACGGGAGGCGTTC
CTGA

Protein sequence : 
MHTSQDLRGAEAVRLEAVSKSYGRGSGRVAALRGLGMSFGHGTFTAVMGPSGSGKSTFLHCAAGLVRPSSGRVTVGGIDL
SGLDDAELTRLRRDRIGFVFQSFNLLPALTVSQNIALPLRLAGQRPDEGLVRAVVRRVGLSERIGHLPAQLSGGQQQRVA
IARALVTRPTVVFADEPTGALDTRAAASVLTLLRESVDTAGRTLVMVTHDPVAASYADRVVFLADGAFAGELHRPTADAV
AARMTRLGAWEDEPRHRSMPQAHGRRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-31 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-43 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-43 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-43 46
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-39 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCATT_p15960 YP_006051742.1 ABC transporter related protein CP001581.1.gene798.p Protein 6e-43 47
SCATT_p15960 YP_006051742.1 ABC transporter related protein CP001581.1.gene598.p Protein 1e-43 45
SCATT_p15960 YP_006051742.1 ABC transporter related protein NC_008702.1.4606598. Protein 2e-37 44
SCATT_p15960 YP_006051742.1 ABC transporter related protein NC_012469.1.7686878. Protein 3e-42 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCATT_p15960 YP_006051742.1 ABC transporter related protein VFG2059 Protein 2e-12 41