Gene Information

Name : F11_04800 (F11_04800)
Accession : YP_006047227.1
Strain : Rhodospirillum rubrum F11
Genome accession: NC_017584
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1107226 - 1108746 bp
Length : 1521 bp
Strand : -
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGCTCTATGCCGCCCCCGGTACAGCGGACGCGATCTTCGCCTTCAAGCCGCGCTACGATAATTTCATCGATGGCACCTG
GCAGCCGCCGGTGCGGGGAGAGTACTTCGACAATGTGACGCCGATCACCGGCAAGGTGTTTTGCAAGGCCGCCCGGTCGA
CCGAGGAGGACATCACCCTGGCCCTTGACGCCGCCCATGCCGCGGCCGATCGCTGGGGCCGGACCACGGCGGCCGAACGC
GCCCTGATCCTCAACCGCATCGCCGACCGTCTCCAGGACAACCTGGAAACCCTGGCCTATGTCGAGAGCATCGATAACGG
CAAGCCGATCCGCGAAACCCTGGCCGCCGACATCCCCCTGGCCATCGATCACTTCCGCTATTTCGCCGCCTGCATCCGCG
CCCAGGAAGGCAGCCTGTCGCAAATCGACGAGACGACGATCGCCTATCACTTCAACGAACCTTTGGGGGTCGTCGGCCAG
ATCATCCCCTGGAACTTCCCGATCCTGATGGCCACCTGGAAACTGGCCCCGGCCCTGGCGGCGGGCAATTGCATCGTCCT
CAAGCCGGCCGAGCAGACCCCGATCAGCATTCTGGTTCTGACCGAGTTGATCGCCGATCTGCTGCCGCCGGGCGTGCTCA
ACGTCGTCAACGGCTTCGGCCTGGAAGCGGGCAAGCCGCTGGCCTCAAGCAAGCGCATCGCCAAGATCGCCTTCACCGGC
GAAACCGCCACCGGCCGGCTGATCATGCAATACGCCAGCCAGAACCTGATCCCGGTGACCCTGGAGCTGGGCGGCAAGTC
GCCCAACGTGTTCTTCGACGACATCGCCAGCGCCGATGACAGCTTCTTTGACAAGGCGGTCGAAGGCTTCGTCATGTTCG
CGCTGAACCAGGGCGAGATCTGCACCTGCCCGTCGCGCGCCCTGATCCACGAATCGCTTTATGACCGCTTCATCGAGCGC
GCCCTGGCCCGCGTCGCCGTCATCAAGCAGGGCAGCCCGCTTGATACCGAAACGATGATCGGCGCCCAGGCTTCGACCGA
GCAGATGGACAAGATCCTGTCCTACATGGACATCGGCCGCGAGGAGGGGGCGACCGTGCTGGCCGGCGGCGCCCGCGCCG
AACTCGGCGGCGAGTTGGACGGCGGCTATTACGTTCAGCCGACCGTGTTCAAGGGCAACAACAGCATGCGCATCTTCCAA
GAGGAGATCTTCGGGCCGGTGGTCGCGGTGACCACCTTCAAGGACGAGGACGAGGCGCTGCATCTGGCCAATGACACCCA
TTACGGCCTGGGTTCGGGGGTGTGGACGCGCGACGGCAACCGCGCCTTCCGCTTCGGTCGCGGCATCAAGGCCGGGCGGG
TGTGGACCAATTGCTATCATCTTTATCCGGCCCACGCGGCCTTCGGCGGCTACAAGCAGTCGGGGATCGGTCGGGAAAAC
CATCACATGATGCTCGACCACTACCAGCAGACCAAGAACCTGCTGGTCAGCTACGACCCCAAAGCCATGGGGTTCTTTTA
A

Protein sequence :
MLYAAPGTADAIFAFKPRYDNFIDGTWQPPVRGEYFDNVTPITGKVFCKAARSTEEDITLALDAAHAAADRWGRTTAAER
ALILNRIADRLQDNLETLAYVESIDNGKPIRETLAADIPLAIDHFRYFAACIRAQEGSLSQIDETTIAYHFNEPLGVVGQ
IIPWNFPILMATWKLAPALAAGNCIVLKPAEQTPISILVLTELIADLLPPGVLNVVNGFGLEAGKPLASSKRIAKIAFTG
ETATGRLIMQYASQNLIPVTLELGGKSPNVFFDDIASADDSFFDKAVEGFVMFALNQGEICTCPSRALIHESLYDRFIER
ALARVAVIKQGSPLDTETMIGAQASTEQMDKILSYMDIGREEGATVLAGGARAELGGELDGGYYVQPTVFKGNNSMRIFQ
EEIFGPVVAVTTFKDEDEALHLANDTHYGLGSGVWTRDGNRAFRFGRGIKAGRVWTNCYHLYPAHAAFGGYKQSGIGREN
HHMMLDHYQQTKNLLVSYDPKAMGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-140 65
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-148 64
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-148 64
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-148 64
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-147 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F11_04800 YP_006047227.1 aldehyde dehydrogenase VFG0082 Protein 6e-141 65