Gene Information

Name : F11_04030 (F11_04030)
Accession : YP_006047073.1
Strain : Rhodospirillum rubrum F11
Genome accession: NC_017584
Putative virulence/resistance : Resistance
Product : cystathionine gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 938426 - 939598 bp
Length : 1173 bp
Strand : -
Note : COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases

DNA sequence :
ATGAGCGCGTCCATCATCACCACCACCAAGGGCTTCGCCACCTGGGCCGTCCACGCCGGCCATGGCGCCGATGCGACCAC
CGGCGCGGTCATGACGCCGATCTACGCCACCTCAACCTTCGCCCAATCCTCGCCGGGCAAGCATACGGGGTGGGAATACG
CTCGCTCGGGCAATCCGACCCGCGCCGCCTTTGAACGCGCCGTCGCCGAATTGGAAGGCGGCACCAACGGCTATGCCTTC
GCCTCCGGCCTCGCCGCCGAGGCGACCATTCTCGATCTGCTCGACCACGGCGCCCATATCATCGCCGGCGACGACCTGTA
CGGCGGATCCTGGCGATTGTTTGAAAAGGTGCGGGCGCGCTCGGCCGGCTTGACGGTCAGCTATGTCGATCCCAGCGACC
TTGGCGCCGTGGCCCAGGCGATCACCCCGCAGACCAAGCTGATCTGGATCGAAACGCCAAGCAATCCGCTGCTCAAGATC
GCCGACCTCGCGGCTTTGGCCGCCTTGGCCAAGGAGCATGGCCTGCGCACGGTGGTCGATTCGACCTTCGCCACGCCGTG
GATCCAGCGCCCCCTTGATCTTGGCATCGATATCGTCGTCCATTCGGCGACCAAATACCTGAACGGTCATTCCGACGTGA
TCGCCGGGGTGGTGGTGGTCAAGGATCCCGATCTCGCCAGCCAGTTGGGCTTCCTGCAAAACGCCACCGGCGCCGTGCTC
GATCCCTTCGCCGCCTTCCTGGCCCTGCGCGGCCTGAAGACCCTGGCCCTGCGCATGGACCGCCATTCGGCCAATGGCTT
GGCCGTCGCCCATGCCCTGGAAGGCCGGGCCAAGGTTCGCCGCGTGCTTTATCCCGGCCTCGCCAGCCACCCCCAGCACG
CACTGGCCCGCCAGCAGATGCGCGCCTTCGGCGGCATGCTCACCCTGGATCTCGAGAGCGATCTGGCCGGAACCGTGCGC
TTCCTGGAAGCCTTGAAACTGTTCACCCTGGCCGAAAGCCTGGGCGGCGTGGAAAGCCTAGCCGGCCATCCGGTGACCAT
GAGCCACGGATCGATCCCGGTCGAACGCCGGACGGCCCTTGGCATCACCGACACCCTGGTCCGCCTGTCGGTCGGCATCG
AAGACGCCGGCGATCTGATCGCCGATCTCGATCAGGCGCTGGCCGTCGTCTGA

Protein sequence :
MSASIITTTKGFATWAVHAGHGADATTGAVMTPIYATSTFAQSSPGKHTGWEYARSGNPTRAAFERAVAELEGGTNGYAF
ASGLAAEATILDLLDHGAHIIAGDDLYGGSWRLFEKVRARSAGLTVSYVDPSDLGAVAQAITPQTKLIWIETPSNPLLKI
ADLAALAALAKEHGLRTVVDSTFATPWIQRPLDLGIDIVVHSATKYLNGHSDVIAGVVVVKDPDLASQLGFLQNATGAVL
DPFAAFLALRGLKTLALRMDRHSANGLAVAHALEGRAKVRRVLYPGLASHPQHALARQQMRAFGGMLTLDLESDLAGTVR
FLEALKLFTLAESLGGVESLAGHPVTMSHGSIPVERRTALGITDTLVRLSVGIEDAGDLIADLDQALAVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-74 48
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 8e-76 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-55 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F11_04030 YP_006047073.1 cystathionine gamma-lyase BAC0207 Protein 4e-65 46