Gene Information

Name : F11_03990 (F11_03990)
Accession : YP_006047065.1
Strain : Rhodospirillum rubrum F11
Genome accession: NC_017584
Putative virulence/resistance : Unknown
Product : lipoprotein YaeC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 930140 - 930946 bp
Length : 807 bp
Strand : +
Note : COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen

DNA sequence :
ATGAGGATGGCGAAGATCGTGCGAGTACCCGCCCTTCGCGTGGCCTTGGCTGGGGCGCTGCTGGTCCTTGGCCTTGGCCC
TTGCCTAGCGCAAACCATCCGCCTGGGCGTCACCCCCGGCCCCCATGCCCAGATCGCCGAGGCTGTGGTGCCGGTGGCCC
GCGCCCAGGGGCTTGAGGTCAAGGTGATCGAATTCAGCGACGGCACCTTGATCAACGCCGCCACCAATGAAGGGGAGCTG
GAGGCCAACGCTTTTCAGCATGGTCCCTATCTTGAAGGCCAGATCAAGGATCGCGGCTATGATCTGGTGTCGATCGCCAA
GACCGTGCTGCTGCCGATGGCGGCCTATTCCAAGCGCGTCGCCGCCCTTGGCGACCTGCCGCAAAAGGCCAAGGTATCCA
TCCCCAATGATCCGACCAATGGCGGCCGGGCGCTCAAGCTGCTGGAGGCCGGGGGCCTGCTGACCCTCAAGCCCGGCCTG
GGCTTCGCCTCGACGGTCTTCGATATCGACAGCAACCCCAAGAACCTGCGGATTCTGGAGCTGGAAGCGACCCAGGTGCC
GCGCTCGCTTGACGATGTCGATCTCGCCGTCATCAACACCAATTACGCCCTGGCCACCGGCCTTGATCCTTTGCGGGATT
CGCTGCTGCGCGAAGGCGATCTGTCGCAATACTTCTGCCTGATCGCCGTTCGCCGCCAGGATGCCGATCAACCCTGGGCC
AAGGTTCTGCGCCAGTCGTTTCTCTCCCCCGAGGTCAAGGCCTTCGTCGCCACCACCTTCCACGGCAATATTCTTGCCGG
CTGGTAG

Protein sequence :
MRMAKIVRVPALRVALAGALLVLGLGPCLAQTIRLGVTPGPHAQIAEAVVPVARAQGLEVKVIEFSDGTLINAATNEGEL
EANAFQHGPYLEGQIKDRGYDLVSIAKTVLLPMAAYSKRVAALGDLPQKAKVSIPNDPTNGGRALKLLEAGGLLTLKPGL
GFASTVFDIDSNPKNLRILELEATQVPRSLDDVDLAVINTNYALATGLDPLRDSLLREGDLSQYFCLIAVRRQDADQPWA
KVLRQSFLSPEVKAFVATTFHGNILAGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nlpA AAW51766.1 NlpA Not tested AGI-3 Protein 5e-38 44