|
Name : fliI (F11_02700) Accession : YP_006046807.1 Strain : Rhodospirillum rubrum F11 Genome accession: NC_017584 Putative virulence/resistance : Virulence Product : flagellum-specific ATP synthase Function : - COG functional category : - COG ID : - EC number : - Position : 620682 - 622109 bp Length : 1428 bp Strand : + Note : COG1157 Flagellar biosynthesis/type III secretory pathway ATPase DNA sequence : ATGAGCGCGATTTTCTCCAATTTGCTGAACGATCTGGCGAAGCTGCCCGAGCGGCGGATTTTCGGCCGGGTGGTCGGCGT CCAGGGCATGCTGGTGGAAATCGGCGGCGCCCAAACCAATTTGTCGGTCGGCGATCGCTGCGCCGTGATCGCCCGCGACG GCCGGCCGATCACCTGCGAGGTCATCGGTTTCCGCGCCGCCCGCGCCCTGCTCATGCCCTTCTCGGTTCTGGACGGAGTC GGCCTGGGCTGCCGGGCCGAGGTGATCGAGGGGGTGCCGGCGATCTATCCGACCCGCGACTGGCTGGGGCGGGTGATCAA CGCCATGGGCGAGGCGGTCGACGGCAAGGGGGCGCTGCCCGCCGGCGAACGCGCCGTAGCCATTCGCGGCCGGCCGCCCA GCGCCCATTCCCGCCAACGCGTCGGCGGCAAGCTGGATCTGGGCGTGCGGGCGATCAACACCTTCCTCACTTGCTGCCGG GGGCAGCGCATGGGCATCTTCGCCGGATCGGGCGTGGGTAAAAGCTCGGTCATGTCGATGTTCATCCGCAATACCAACGC CGATGTCATCGTCATGGGGCTGGTGGGCGAGCGCGGGCGCGAGGCGCGGGAATTCATCGAGGACGATCTGGGCGAAGAGG GCCTGAAACGGGCGGTCACCGTGGTGGCGACCAGCGATGAAAGTCCGCTGATGCGCCGTCAGGCGGCCTATATGACCCTG GCCGTCGCCGAATACTTCCGCGATCAGGGGCTGGACGTGCTGTGCCTGATGGACAGCGTGACGCGCTTCGCCATGGCCCA GCGCGAAATCAGCCTGTCGGCCGGCGAGCCGCCGGCGTCGAAGGGCTATACGCCAACGGTTTTCGCCGAACTGCCCAAGC TGCTCGAACGGGCCGGTCCGGGGGTCGAGGGATCGGGCTCCATCACCGGATTGTTCACCGTTCTGGTCGAAGGCGATGAT CACAACGAGCCAATCTCCGACGCGGTGCGCGGTATCCTCGATGGGCATATCGTGCTTGATCGCGCCATCGCCGAACGCGG GCGCTATCCGGCGATCAATATCTTGCGCAGCGTCTCGCGAACCATGCCCGGCTGTAACAGTCCGGCGGAAAATGCCCTGG TCGCCAAGGGGCGGCGGCTGATGGCAGCCTATGAGAATATGGCCGAGTTGATCCGCCTAGGCGCCTATCGCAAGGGGTCC GACCCCGAGACCGATACCGCCATCCATTATCATCCGGCGCTCGACGCCTTTTTGACCCAGGCCAAAACCGAAGGGACCGA TCTGGCCACCGGCTATGCCATGCTTGAGGCCGCCCTGGCGCCGCAGATCGAGATGAGCCCGCCGCCGATGGCGGCCAAGG GCTTCCCGGCGCCCTCGCGCAGTTTCCAGCCGTCGCGCTCGCCCGCGCCGCCGCGCAAGCGCGACTAG Protein sequence : MSAIFSNLLNDLAKLPERRIFGRVVGVQGMLVEIGGAQTNLSVGDRCAVIARDGRPITCEVIGFRAARALLMPFSVLDGV GLGCRAEVIEGVPAIYPTRDWLGRVINAMGEAVDGKGALPAGERAVAIRGRPPSAHSRQRVGGKLDLGVRAINTFLTCCR GQRMGIFAGSGVGKSSVMSMFIRNTNADVIVMGLVGERGREAREFIEDDLGEEGLKRAVTVVATSDESPLMRRQAAYMTL AVAEYFRDQGLDVLCLMDSVTRFAMAQREISLSAGEPPASKGYTPTVFAELPKLLERAGPGVEGSGSITGLFTVLVEGDD HNEPISDAVRGILDGHIVLDRAIAERGRYPAINILRSVSRTMPGCNSPAENALVAKGRRLMAAYENMAELIRLGAYRKGS DPETDTAIHYHPALDAFLTQAKTEGTDLATGYAMLEAALAPQIEMSPPPMAAKGFPAPSRSFQPSRSPAPPRKRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-77 | 47 |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-78 | 46 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-78 | 46 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 3e-78 | 46 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 7e-78 | 46 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 3e-78 | 46 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 4e-78 | 46 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 5e-78 | 46 |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 3e-78 | 46 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 3e-78 | 46 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 6e-64 | 45 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 1e-64 | 45 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 6e-64 | 45 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 3e-64 | 45 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 2e-64 | 45 |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 5e-67 | 44 |
| escN | YP_003232153.1 | T3SS structure protein EscN | Virulence | LEE | Protein | 5e-60 | 44 |
| unnamed | AAL06369.1 | EscN | Virulence | LEE | Protein | 7e-59 | 44 |
| escN | CAI43874.1 | EscN protein | Virulence | LEE | Protein | 4e-60 | 43 |
| escN | YP_003223475.1 | translocator EscN | Virulence | LEE | Protein | 5e-60 | 43 |
| escN | AAK26715.1 | EscN | Virulence | LEE | Protein | 1e-59 | 43 |
| escN | AAL57542.1 | EscN | Virulence | LEE | Protein | 1e-59 | 43 |
| escN | CAC81862.1 | EscN protein | Virulence | LEE II | Protein | 4e-60 | 43 |
| escN | AFO66300.1 | putative LEE-encoded type III secretion system ATPase | Virulence | SESS LEE | Protein | 7e-58 | 43 |
| escN | AFO66415.1 | putative LEE-encoded type III secretion system ATPase | Virulence | SESS LEE | Protein | 7e-58 | 43 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 2e-53 | 42 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 7e-57 | 41 |
| hrcN | AAT96195.1 | HrcN | Virulence | T-PAI | Protein | 6e-57 | 41 |
| hrcN | AAR25633.1 | type III secretion cytoplasmic ATPase HrcN | Not tested | Not named | Protein | 5e-53 | 41 |
| hrcN | AAT96258.1 | HrcN | Virulence | S-PAI | Protein | 3e-61 | 41 |
| hrcN | NP_791227.1 | type III secretion cytoplasmic ATPase HrcN | Virulence | Hrp PAI | Protein | 2e-55 | 41 |
| hrcN | AAT96299.1 | HrcN | Virulence | S-PAI | Protein | 1e-61 | 41 |
| hrcN | AAT96339.1 | HrcN | Virulence | S-PAI | Protein | 3e-62 | 41 |
| hrcN | AAB06001.1 | HrcN | Virulence | Hrp PAI | Protein | 2e-63 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliI | YP_006046807.1 | flagellum-specific ATP synthase | VFG1254 | Protein | 7e-81 | 48 |
| fliI | YP_006046807.1 | flagellum-specific ATP synthase | VFG2499 | Protein | 3e-76 | 48 |
| fliI | YP_006046807.1 | flagellum-specific ATP synthase | VFG2144 | Protein | 5e-80 | 46 |
| fliI | YP_006046807.1 | flagellum-specific ATP synthase | VFG0192 | Protein | 2e-76 | 46 |
| fliI | YP_006046807.1 | flagellum-specific ATP synthase | VFG2331 | Protein | 3e-71 | 46 |
| fliI | YP_006046807.1 | flagellum-specific ATP synthase | VFG0390 | Protein | 2e-78 | 45 |
| fliI | YP_006046807.1 | flagellum-specific ATP synthase | VFG0515 | Protein | 8e-65 | 45 |
| fliI | YP_006046807.1 | flagellum-specific ATP synthase | VFG0048 | Protein | 1e-75 | 44 |
