Gene Information

Name : F11_19120 (F11_19120)
Accession : YP_006050081.1
Strain : Rhodospirillum rubrum F11
Genome accession: NC_017584
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4287772 - 4288758 bp
Length : 987 bp
Strand : -
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGACCACCGCCGAGTCCGGCGACACGGCGCCAAGCAGCCGCGGACCGTCGCTGGCGGTCCAGGCCGAGGCTTTCCTGGA
GATGATGCTGGCCGAGCGCGGCGCGGCGCGGCGCACGGTGGAAGCCTATGGCCGCGACCTGCGCGATTACGCGGCCTTCC
TGCGCGAAAAGGGCCTGGACGGGCTGACGGTGTCGCGGCCGACCCTGCGCGCCTATCTGGCGACGATGGCCGCCGCCGGA
CTGGCGCCGCGCAGTCAGGCGCGCAAGCTGTCGTGCCTGCGCCAGTTCCACGGCTTTCTGGTCAGCGAGGGCCGCCGCCC
CGACGACCCCACCATTGGCCTGGATTCGCCGCGCCTTGGCCGACCGCTGCCCCGGGTGCTGTCGGAAGCCGAGGTCGACG
CCTTGCTGGTGGCGGCCGAGGCCGGCGAAGGGGCGCGCGGCCTGCGGGCGCGGGTGCTGCTGGAATTGCTCTATAGCACC
GGCTTGCGGGTCTCCGAGCTGGTCAGCCTGCCGCTGTCGGTGGCCAACCGCGATCCCGAAACCATCCTGGTGCGCGGCAA
GGGCGACAAGGAGCGTCTGGTGCCCCTTGGCCTGCCCGCCCGCGCCGCCCTGCGCGACTGGCTGATCGCCCGGCCGACGA
CCCTGCCCGCAAGCGGCGCGGCGCGGCGCCGGGCCGACCGCTTCTTGTTCCCCTCCTCGGCGGCGGAAGGCCATCTGACG
CGCGACGGCTTCGCCAAGATGCTGGGCGAGTTGGCGCTGCGGGCCGGCATCGATCCGGCCCGGGTTTCCCCCCATGTGCT
GCGCCATTGCTTCGCCAGCCACATGCTGGCCCATGGCGCCGACCTGCGCGGCGTGCAAACCCTGCTCGGCCACGCCGATA
TCGCCACCACCCAGATCTACACCCACGTCCTCGACGACCGCCTGACCACCCTGGTCCGCACCGCCCACCCCTTGGCGCGG
CTCAAGGGGGAGGGAAATAATAAATAG

Protein sequence :
MTTAESGDTAPSSRGPSLAVQAEAFLEMMLAERGAARRTVEAYGRDLRDYAAFLREKGLDGLTVSRPTLRAYLATMAAAG
LAPRSQARKLSCLRQFHGFLVSEGRRPDDPTIGLDSPRLGRPLPRVLSEAEVDALLVAAEAGEGARGLRARVLLELLYST
GLRVSELVSLPLSVANRDPETILVRGKGDKERLVPLGLPARAALRDWLIARPTTLPASGAARRRADRFLFPSSAAEGHLT
RDGFAKMLGELALRAGIDPARVSPHVLRHCFASHMLAHGADLRGVQTLLGHADIATTQIYTHVLDDRLTTLVRTAHPLAR
LKGEGNNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-27 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-27 43