Gene Information

Name : F11_18680 (F11_18680)
Accession : YP_006049993.1
Strain : Rhodospirillum rubrum F11
Genome accession: NC_017584
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4189789 - 4190529 bp
Length : 741 bp
Strand : +
Note : COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component

DNA sequence : 
ATGGACGGCTCCCGCGACGGTTCCCCGGTGATCGATATCACGGATCTCCAGCTTAAGCTGAGGGGCCCGGCCGGCGAGGT
CAACATTCTGCGCGGTCTCGACCTGCGGGTGGCGGCCGGGGAAACCCTGGGCGTCGTCGGTCCGTCGGGGTCGGGAAAGA
CCTCGCTGCTGATGGTCGCCTGCGGGCTGGAGCGCGCCACCGCCGGCCGGGTGGTGGTGGCCGGCCAGGATCTGACGGCG
CTGTCGGAAGACGCCCTGGCGCTGTTTCGCCGCGACAGCATCGGCATCGTCTTTCAGGCCTTCCACCTGATTCCGACGAT
GACGGCGCTCGAAAACGTCGCCGTTCCCCTGGAATTCGCCGGGCGGCGCGACGCTTTCGAGCGCGCCCGCCATCACCTGG
AAACCGTTGGCCTGGGCCATCGCCTTGGTCATTATCCCGGTCAGCTGTCGGGCGGAGAGCAACAGCGCGTCGCCCTGGCC
CGCGCCTTCGCCCCTGAGCCCCGGCTGCTGCTGGCCGACGAGCCGACCGGTAATCTCGATGGCGAGACCGGCGAGAAGAT
CATGGCCCTGCTGTTTGATTTGCGGGCGCGCGCCGGCACCACCTTGGTGCTGATCACCCATGATATGGATCTGGCGCGGC
GCTGCGACCGCATCGTTCATGTGCGTGACGGCCGCATCACCGGTGAGGAAAGCGGTCGCGGCGAAGGCTCGGCCCACAGC
CTGCTGGCGGCGGTGGAATGA

Protein sequence : 
MDGSRDGSPVIDITDLQLKLRGPAGEVNILRGLDLRVAAGETLGVVGPSGSGKTSLLMVACGLERATAGRVVVAGQDLTA
LSEDALALFRRDSIGIVFQAFHLIPTMTALENVAVPLEFAGRRDAFERARHHLETVGLGHRLGHYPGQLSGGEQQRVALA
RAFAPEPRLLLADEPTGNLDGETGEKIMALLFDLRARAGTTLVLITHDMDLARRCDRIVHVRDGRITGEESGRGEGSAHS
LLAAVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F11_18680 YP_006049993.1 ABC transporter NC_008702.1.4606598. Protein 5e-32 48
F11_18680 YP_006049993.1 ABC transporter NC_012469.1.7686878. Protein 3e-37 41