Gene Information

Name : F11_18425 (F11_18425)
Accession : YP_006049942.1
Strain : Rhodospirillum rubrum F11
Genome accession: NC_017584
Putative virulence/resistance : Unknown
Product : ATP-dependent protease ATP-binding subunit HslU
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4141035 - 4142342 bp
Length : 1308 bp
Strand : +
Note : COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit

DNA sequence :
ATGAACGCCTTCACCCCCCGCGAGATCGTTTCCGAGCTTGATCGCCACATCGTCGGGCAGAAGGACGCCAAGCGCGCCGT
CGCCATCGCCCTGCGCAACCGCTGGCGCCGCCAGCAGCTGTCCGAGGCCCTGCGCGACGAGGTGCTGCCCAAGAACATCC
TGATGATCGGGCCCACCGGCGTCGGCAAGACCGAGATCGCCCGCCGTCTGGCCAAACTGGCCCAGGCCCCCTTCCTCAAG
GTCGAGGCCACCAAATTCACCGAGGTCGGCTATGTCGGCCGCGACGTGGAAAGCATCATCCGCGATCTGGTGGAAACCGC
CCTGACCCAGGAGCGCGACCGCCTGCGCAAGCAAGTCAACGCCAAGGCCGAGGCCAACGCCGAGGAGCGGGTGCTCGATG
CCCTGGTCGGCGATCGCGCCTCGCCCGAAACCCGCCAGAAGTTCCGCAAGATGCTGCGCGAAGGCCAGATCAACGACAAG
GAGATCGAGGTTCAGGTCCAAGACAGCGGCGGTGCCCTGCCGACCATGGATATTCCGGGCATGCCCGGGGCCCAGATGGG
CATGCTCAATCTCAACGACATCTTCGGCAAGGCCTTTGGCAACCGCACCAAGGCGCGCAAGATGACGGTCGAAGACTCCC
ACGCCGTTCTGGTGCGCGAGGAGGCCGACAAGCTGCTCGACGAGGAGCAGGTGGTCAAAGCCGCCATCGCCGCCGTCGAG
AACAACGGCATCGTCTTCCTTGATGAAATCGACAAGATCGCCACGGCGTCGGAACGCCGGGGCGGCGACGTCAGCCGCGA
GGGCGTTCAGCGCGACCTGCTGCCGCTGATCGAAGGCACGACGGTTTCAACCAAATACGGTCCGGTGAAGACCGACCACG
TGCTGTTCATCGCCTCGGGCGCCTTCCATACGGCCAAGCCCGCCGATCTGCTGCCCGAACTGCAGGGCCGTTTGCCGATC
CGCGTCGAGTTGAGCGCGCTCAACGCCGGCGATTTCAAGCGCATCCTGCTTGAACCCGAAGCCAGCCTGATCACCCAGTA
CAAGGCCCTGCTGGCGACCGAGGGCGTCACCTTGGAGTTTCCCGACGACACGGTCGAGGCCATCGCCGAGATTGCCACCG
AAATCAACGGCTCGGTCGAAAACATCGGGGCGCGGCGCCTGCATACGGTCCTGGAGCGCCTGCTCGAGGAGATCAGCTTC
ACCGCCACCGACCGTTCGGGCGAAACCATCGTCGTCACCCGCGACATGGTCAAGGAGCGCGTCGGCGCCCTGGCCGCCAA
GGCCGATCTGTCGCGGTTCATCCTGTAA

Protein sequence :
MNAFTPREIVSELDRHIVGQKDAKRAVAIALRNRWRRQQLSEALRDEVLPKNILMIGPTGVGKTEIARRLAKLAQAPFLK
VEATKFTEVGYVGRDVESIIRDLVETALTQERDRLRKQVNAKAEANAEERVLDALVGDRASPETRQKFRKMLREGQINDK
EIEVQVQDSGGALPTMDIPGMPGAQMGMLNLNDIFGKAFGNRTKARKMTVEDSHAVLVREEADKLLDEEQVVKAAIAAVE
NNGIVFLDEIDKIATASERRGGDVSREGVQRDLLPLIEGTTVSTKYGPVKTDHVLFIASGAFHTAKPADLLPELQGRLPI
RVELSALNAGDFKRILLEPEASLITQYKALLATEGVTLEFPDDTVEAIAEIATEINGSVENIGARRLHTVLERLLEEISF
TATDRSGETIVVTRDMVKERVGALAAKADLSRFIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 2e-93 44