Gene Information

Name : F11_17690 (F11_17690)
Accession : YP_006049795.1
Strain : Rhodospirillum rubrum F11
Genome accession: NC_017584
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3977825 - 3978595 bp
Length : 771 bp
Strand : +
Note : COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component

DNA sequence : 
ATGGTGCGCGCGGATGGTCTTTGTCTGAGTTATTCCGGCACCGATGCCCCGGTTCACGCCCTGAAGGACGTTGATCTGAC
GATCGAAGCGGGGGATTTCGTCTCGCTGATCGGGCCTTCGGGCTGCGGCAAGACAACGCTGCTGCGCGTCATCGCCGATC
TTGAACAGCCGACCGGCGGCAGCATCACCGTTGAGGGCGTCTCGCCCCACGAGGCCCGCGAACGCCGGCTTTACGGCTAT
GTCTTCCAGGCTCCAGCGCTGTTTCCCTGGCGCACGGTCTTGCGCAACGTCACCTTGCCGCTGGAAATCATCGGCCTGCC
CAAGGACGAGCGCGAGGCGCGGGCCCGCGACAATCTGGCCCGCGTTGGCCTGACCGGCTTCGAGGGCAAGTTCCCCTTCC
AACTGTCGGGGGGCATGCGCCAAAGGGTGTCGATCGCCCGCGCCCTGGCCCTGGCGCCCGATCTGCTGCTGATGGACGAA
CCCTTCGGCGCCCTCGACGAGATCACCCGTCACGATCTCAACCAGCAACTCACCGATCTGTGGCGCGAAACCGGCAAAAC
CTGCGTTTTCGTCACCCATTCGATCTCGGAGGCGATCTTCCTGTCGACCAAGGTGATCGTCATGACCCCGCGCCCCGGCC
GGGTGATCGATGTCGTCGATTGCTCCGGGCTGCCCCGCGTGCGCACGGCGGCCCTGCGCGACGCGCCGGAGTTTCGCGCC
CTGGCCGCCCGGGTGCGCCTGGGTCTGCGGGAAGGCCATGATGGCCACTAA

Protein sequence : 
MVRADGLCLSYSGTDAPVHALKDVDLTIEAGDFVSLIGPSGCGKTTLLRVIADLEQPTGGSITVEGVSPHEARERRLYGY
VFQAPALFPWRTVLRNVTLPLEIIGLPKDEREARARDNLARVGLTGFEGKFPFQLSGGMRQRVSIARALALAPDLLLMDE
PFGALDEITRHDLNQQLTDLWRETGKTCVFVTHSISEAIFLSTKVIVMTPRPGRVIDVVDCSGLPRVRTAALRDAPEFRA
LAARVRLGLREGHDGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-38 44
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 5e-28 42
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F11_17690 YP_006049795.1 ABC transporter NC_008702.1.4606598. Protein 1e-19 42