Gene Information

Name : F11_14935 (F11_14935)
Accession : YP_006049246.1
Strain : Rhodospirillum rubrum F11
Genome accession: NC_017584
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3356164 - 3356847 bp
Length : 684 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCGCATCCTGGTGATCGAGGATGACAAGGAGGTGGCCGCCCACCTTCTCAAAGGCCTGCGCGAGGCCGGCCATGTCGC
CGACAGCGTGGCCGATGGCCGCGACGGCCTGTTCCAGGCCGCCGGGGAAGCCTATGACCTGCTGATCGTCGATCGCATGC
TGCCCAATGTCGACGGTCTGACCATCGTCCGCACCCTGCGGGCTTCGGGCAAAACGGTGCCGGTGCTGATCCTCTCGGCG
CTCGGCGAGGTCGACGACCGGGTCAAGGGGCTGCGGGCGGGGGGCGATGACTATCTGGTCAAGCCCTTCGCCTTCGCCGA
GCTTCTGGCCCGCATCGACGCCCTGACCCGGCGCACGGCGGGAAGCGACGCCGAACAGACGCGGTTGCGGGCGGGCGAGG
TGGAGATGGACCTGCTGGCCCGCCGGGTCACCCGTGGCTCGCGCACCATCGATCTTCAGCCCCGCGAATTCCGCCTGCTT
GAATACCTGATGCGCCATGCCGATCAGGTGGTCACCCGCACCATGCTTTTGGAAAACGTCTGGGATTATCACTTCGACCC
GCAGACCAACGTCGTTGACGTTCATATCAGCCGCCTGCGCCGCAAGATGGACGAGGGCTTCGCCCAGCCCTTCCTGGAAA
CCGTGCGGGGGGCGGGCTACGTCTTGCGCACCAATGGCTCTTAA

Protein sequence : 
MRILVIEDDKEVAAHLLKGLREAGHVADSVADGRDGLFQAAGEAYDLLIVDRMLPNVDGLTIVRTLRASGKTVPVLILSA
LGEVDDRVKGLRAGGDDYLVKPFAFAELLARIDALTRRTAGSDAEQTRLRAGEVEMDLLARRVTRGSRTIDLQPREFRLL
EYLMRHADQVVTRTMLLENVWDYHFDPQTNVVDVHISRLRRKMDEGFAQPFLETVRGAGYVLRTNGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-42 46
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-41 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F11_14935 YP_006049246.1 two component transcriptional regulator BAC0083 Protein 2e-52 50
F11_14935 YP_006049246.1 two component transcriptional regulator BAC0125 Protein 1e-50 50
F11_14935 YP_006049246.1 two component transcriptional regulator BAC0638 Protein 1e-45 48
F11_14935 YP_006049246.1 two component transcriptional regulator BAC0111 Protein 6e-53 48
F11_14935 YP_006049246.1 two component transcriptional regulator BAC0197 Protein 8e-46 47
F11_14935 YP_006049246.1 two component transcriptional regulator BAC0347 Protein 9e-49 46
F11_14935 YP_006049246.1 two component transcriptional regulator BAC0308 Protein 9e-45 45
F11_14935 YP_006049246.1 two component transcriptional regulator NC_002516.2.879194.p Protein 1e-38 42
F11_14935 YP_006049246.1 two component transcriptional regulator HE999704.1.gene1528. Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F11_14935 YP_006049246.1 two component transcriptional regulator VFG0596 Protein 1e-42 46
F11_14935 YP_006049246.1 two component transcriptional regulator VFG1389 Protein 4e-38 46
F11_14935 YP_006049246.1 two component transcriptional regulator VFG1390 Protein 3e-41 43