Gene Information

Name : F11_14840 (F11_14840)
Accession : YP_006049227.1
Strain : Rhodospirillum rubrum F11
Genome accession: NC_017584
Putative virulence/resistance : Virulence
Product : twin-arginine translocation pathway signal
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3337943 - 3338875 bp
Length : 933 bp
Strand : -
Note : COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin

DNA sequence : 
ATGACGACGGGCAAAGGCAATAACGGCGGGGCGTGGACACGGCGCGCGGTCCTGGGGACGGCGGCCGGCGTGGTCGCCGC
CCTCGGCTTGGGCGCGGGTCGGGCGCGGGCCGCCCGGCGGCTGAAGGTGGTGACCACCTTCACCATCATCGCCGATATGG
CGCGCAATGTGGCCGGGGAAGCCGCCGATGTGGTGTCGATCACCAAGCCCGGCGCCGAAATCCACACCTATCAGCCGACC
CCGGGCGACCTTATGCGGGCGCGCGGCGCTGATCTGGTGCTGTGGAACGGCCTGAATCTGGAATTGTGGTTCGAACAGTT
CTTTGAAAACCTGGGGGACGTCCCCGGTGTCGTGGTGTCGCAAAAGGTGGTCCCGATCGGCATCGGCGAGGGCCCCTATG
AGGGCAAACCCAACCCCCATGCCTGGATGTCGCCGACGGCCGCCCTGCTCTATGTCGATACCATCGCCGAGGCCCTGGCG
ACCCACGACCCGCAAAACGCCGCGCTCTATCGCGACAATGCCGCAAGCTACAAGCGGCGCATCGAGGAGACGGTGGCGCC
CTTGCGGATCGCCCTTGCCGCCCTGCCCGAGGAGCGGCGCTGGCTGGTGACCAGCGAGGGGGCCTTCAGCTACCTCGCCC
GGGATTTTTCGTTGCGCGAGCTTTATCTGTGGCCGATCAACGCCGACCAGCAGGGCCGCCCCCAGCAGGTGCGCAAGGTG
GTCGACGCCATGCGCGCCCAGGCCATTCCCGCCATCTTTTCCGAAAGCACCATTTCTTCGGCCCCGGCCGAACAGGTGGC
CCGGGAAACCGGGGCGCGCTATGGCGGCGTCTTGTATGTCGATTCCCTGAGCGGGCCCGAGGGGCCGGTTCCCAGCTATC
TTGATCTGCTGCGCGTCACCATCGAAACCATCCTTCACGGGCTGGCCCCGTAA

Protein sequence : 
MTTGKGNNGGAWTRRAVLGTAAGVVAALGLGAGRARAARRLKVVTTFTIIADMARNVAGEAADVVSITKPGAEIHTYQPT
PGDLMRARGADLVLWNGLNLELWFEQFFENLGDVPGVVVSQKVVPIGIGEGPYEGKPNPHAWMSPTAALLYVDTIAEALA
THDPQNAALYRDNAASYKRRIEETVAPLRIALAALPEERRWLVTSEGAFSYLARDFSLRELYLWPINADQQGRPQQVRKV
VDAMRAQAIPAIFSESTISSAPAEQVARETGARYGGVLYVDSLSGPEGPVPSYLDLLRVTIETILHGLAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-86 67
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 4e-86 67
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 4e-86 67
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 4e-86 67
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 3e-86 67

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F11_14840 YP_006049227.1 twin-arginine translocation pathway signal BAC0349 Protein 2e-86 67
F11_14840 YP_006049227.1 twin-arginine translocation pathway signal BAC0439 Protein 3e-78 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F11_14840 YP_006049227.1 twin-arginine translocation pathway signal VFG0525 Protein 2e-86 67