Gene Information

Name : F11_14835 (F11_14835)
Accession : YP_006049226.1
Strain : Rhodospirillum rubrum F11
Genome accession: NC_017584
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3336993 - 3337895 bp
Length : 903 bp
Strand : -
Note : COG1121 ABC-type Mn/Zn transport systems, ATPase component

DNA sequence : 
TTGTCCTCGCCCTCGGTCGTTTCGGCGCCCTATCCCTTCGGTATCAAGGTTACCGGGGCCAGCGTCACCTATCGCAACGG
CCATACGGCCTTGCGCGATGCCTCCTTCGAGATCCCGACCGGCACGGTCACCGGTCTGGTCGGCATCAACGGCAGCGGCA
AATCGACGCTGTTCAAGGCGATCATGGGCTTCGTGCCCCTGTCGGTCGGCTCCATCGCCATTCTCGGTCTGCCGGTGCGC
GAGGCCTTGAGGCGCCATCTGGTGGCCTATGTCCCGCAAAGCGAGGATGTCGACTGGACCTTTCCGGTTCTGGTCGAAGA
CGTGGTGATGATGGGCCGCTATGGCCACATGAACCCGCTGCGCATCGCCCGGCGCGCCGATAAGTCGGCGGTTGACCAGG
CGCTTGAGCGCGTCGGCATGGGGGCCTTGCGCAAGCGCCAGATCGGCGAATTATCGGGCGGACAGAAAAAGCGGGTGTTC
CTGGCCCGCGCCCTAGCCCAGGACGGCCGGGTCATCTTGCTTGACGAACCCTTCACCGGCGTCGATGTGACCACCGAAAG
CGAGATCATCACCTTGTTGCGCGCCCTGCGCGCCGAGGGGCGGGTGATGCTGGTCTCGACCCATGATCTGGGCAGCGTGC
CCGAATTCTGTGACCGCGCCGTTTTGCTCAACCGCACGGTTCTGGCCAGCGGGCCGACCGCCGAGGTGTTCACCCGGCGC
AATCTGGAAGCGGCCTTCGGCGGGGTTCTGCGCCATGTGGTGCTTTCCGATCGCGGCCAGGGCGGGGATGGCGCCGGTCA
GCGGCCCCTTGGCGTGCTGTCGGACGACGAACGTCCCTTGGTTCTCTACGACGACCCGCCCGAGGGCGGGGAGGCGCCCA
AGGGCGGCGGAGCGCCGCGATGA

Protein sequence : 
MSSPSVVSAPYPFGIKVTGASVTYRNGHTALRDASFEIPTGTVTGLVGINGSGKSTLFKAIMGFVPLSVGSIAILGLPVR
EALRRHLVAYVPQSEDVDWTFPVLVEDVVMMGRYGHMNPLRIARRADKSAVDQALERVGMGALRKRQIGELSGGQKKRVF
LARALAQDGRVILLDEPFTGVDVTTESEIITLLRALRAEGRVMLVSTHDLGSVPEFCDRAVLLNRTVLASGPTAEVFTRR
NLEAAFGGVLRHVVLSDRGQGGDGAGQRPLGVLSDDERPLVLYDDPPEGGEAPKGGGAPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-82 65
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-82 65
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 8e-83 65
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-83 65
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 6e-83 65
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 8e-39 41
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 1e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F11_14835 YP_006049226.1 ABC transporter BAC0350 Protein 4e-83 65
F11_14835 YP_006049226.1 ABC transporter BAC0440 Protein 7e-82 63
F11_14835 YP_006049226.1 ABC transporter BAC0400 Protein 4e-49 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F11_14835 YP_006049226.1 ABC transporter VFG0526 Protein 3e-83 65