Gene Information

Name : F11_10335 (F11_10335)
Accession : YP_006048330.1
Strain : Rhodospirillum rubrum F11
Genome accession: NC_017584
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2324722 - 2326404 bp
Length : 1683 bp
Strand : -
Note : COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase

DNA sequence :
ATGACCGCGCCGACCCTTCCCTTGGCCTCCCCCCGCCTGATTATCGACGATCTGCGCGTCGCCCTGCCTAAAAGCGCCGA
CCGTCCCTTCGCCCTAAACGGCATTTCGCTGACCGTCGGCGCCGACGAGATCGTCTGTCTGGTCGGCGAAAGCGGCTCGG
GCAAATCGATGACCGCTGGCGCCATCATGCGACTGCTTGGGCCGTCGACGCCGATCACCGGCGGGCGCATCCTGCTTGAA
GGCGTGGATCTGCTCGGCCTGTCCGAAGCGGCCATGCGCGCCGTGCGCGGCGCCCGGGTGGGGATGATCTTCCAAGAACC
GATGACGGCGCTTAATCCGCTGCATACCATCGGCGATCAGATCGCCGAGACCTTCCGCACCCATGGCACGCTTGGCCGCG
CCGAGATCGAACGCCGGGTGCTTGATCTGCTGGCCGAGGTGCTGATCCCCGATCCGGTGGCGGCGGCCAAGGCCTATCCC
CACGAGCTGTCGGGGGGGCAGCGCCAGCGGGCGATGATCGCCATGGCCCTGGCCCTGGAGCCGGCGCTGCTGATCGCCGA
CGAGCCGACCACGGCGCTTGATGTCACCACCCAGGCGCAGATCCTCGCCCTGATCCGCGATCTGCAGCGGCGCAAGGGCA
CGGGCGTGCTGTTCGTCACCCATGATTTCGGCGTGGTGGCGGAAATCGCCGATCGCGTCGCCGTGATGCGCGGCGGCGAG
GTGGTCGAGGAGGGGGCGGCCGCCCAGGTCCTCAACCATCCGCTCCATCCCTATACCCGGGCGCTGATCGCCGCCGTGCC
GCCGCTGGTTCCGGCGCCGCCGCGGCCGGTCACCGGCCCGCCGTTGCTGCGGGTCGAGGGCCTATCGAAGACCTATCGCA
GCGGCGGCTTCTTTGGCCGGGGCGGACGGGTGACCCATGCGGTCAAGGATGTGTCGTTCACCCTGCGGCGCGGGGCGACG
CTGGGGATCGTCGGCGAAAGCGGCTCGGGCAAATCGACCCTGGCGCGCTGCGTCGTCCGCCTGCTGACCAGCGAAAGCGG
CTCCATCCATCTCGACGACATCGATCTATCGGCCCTGACCGACAACGACTGGCACCGCGAAAGCCGGCGCATCCAGATGG
TGTTCCAGGACCCCTATGGCTCGCTCAATCCCCGGCGGCGGGTTGGCGAGCTGGTGGCCCAGGGGCCGATCGTGCGCGGG
GCGCCGCGCCGCGAGGTCGAAGCCCGGGTGCGCGAGCTGTTCGCCCTGGTCGGCCTCGACCCCAAGGCGGTGGACCGCTT
CCCCCACGAGTTCTCCGGCGGGCAGCGCCAGCGCATCGGTCTGGCCCGCGCCCTGGCCCTTGATCCCGATGTGCTGGTCG
CCGACGAGGCGGTCTCGGCCCTTGACGTCTCGGTGCAGGCCCAGGTTCTGGCCCTGCTTGCCGATCTGCGCGAGCGGCTG
AATTTGTCGGTGCTGTTCATCACCCATGATCTGCGGGTGGCCGGACAGATCGCCGATGATATCCTGGTGATGAAGGATGG
CGCCGTGGTCGAAGCCGGTCCGACCGCCCGGGTGTTCGCCGATCCCCATCACCCCTATACGAAAACCCTGATGGCGGCGG
TGCCCGGACGGGCCTGGATGCCCCCGGTCACGGCGGCCGACCGGCGGGCCGACGACCCGGCGCCCGTTCCCCTTGGTCTT
TAG

Protein sequence :
MTAPTLPLASPRLIIDDLRVALPKSADRPFALNGISLTVGADEIVCLVGESGSGKSMTAGAIMRLLGPSTPITGGRILLE
GVDLLGLSEAAMRAVRGARVGMIFQEPMTALNPLHTIGDQIAETFRTHGTLGRAEIERRVLDLLAEVLIPDPVAAAKAYP
HELSGGQRQRAMIAMALALEPALLIADEPTTALDVTTQAQILALIRDLQRRKGTGVLFVTHDFGVVAEIADRVAVMRGGE
VVEEGAAAQVLNHPLHPYTRALIAAVPPLVPAPPRPVTGPPLLRVEGLSKTYRSGGFFGRGGRVTHAVKDVSFTLRRGAT
LGIVGESGSGKSTLARCVVRLLTSESGSIHLDDIDLSALTDNDWHRESRRIQMVFQDPYGSLNPRRRVGELVAQGPIVRG
APRREVEARVRELFALVGLDPKAVDRFPHEFSGGQRQRIGLARALALDPDVLVADEAVSALDVSVQAQVLALLADLRERL
NLSVLFITHDLRVAGQIADDILVMKDGAVVEAGPTARVFADPHHPYTKTLMAAVPGRAWMPPVTAADRRADDPAPVPLGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-68 46
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-68 46
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-68 46
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-68 46
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-77 44