Gene Information

Name : F11_08150 (F11_08150)
Accession : YP_006047893.1
Strain : Rhodospirillum rubrum F11
Genome accession: NC_017584
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1860049 - 1860807 bp
Length : 759 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGAGTAAGTCCCCTTCCGTCTCCAGTCCGCAGACCGCCCCCGGTCCGCAGACCGCGCCCGGTCCGCAGGCCAGCAAGGT
GCCGCAGGCGGCCTTGCGCTTGGATAAGGTCACCCGCTCGTTCAGCCAGGGCCGCGAGGTCCTCAACGTGCTGACCGGGG
CCGATCTGGCCGTCAACCCGGGCGAGATCGTCGCCCTGGTCGGGCCCTCGGGGGCGGGAAAATCCACGCTTTTGCAGATT
TGCGGGCTTTTGGAAAAACCCACGGCTGGCGAGGTGCGGATCGGCGGCATCAGCTGCGGCCAATTGTCCGAGGATCGCCG
CACCCTGTTGCGCCGCGATCACTTGGGCTTCGTCTATCAGTACCACCACCTGCTGCCCGAGTTCTCGGCGGCCGAGAATA
TCGTCGTGCCGCAGATGATCGCCGGGATCGGCCGCAAGCCGGCCCTGGCGCGGGCGGCCGAGCTTCTGGCCAAGATGGGG
CTTTCTGAGCGCCAGGACCACCGGCCGGGCCAGCTTTCGGGCGGCGAGCAACAGCGGGTGGCGATTTGCCGGGCTTTGGC
CAACCGCCCCAAGCTGCTGCTGGCCGACGAGCCGACCGGCAACCTTGACCCCAATACGGCCGAGCGGGTATTCCAGGCCC
TGCTCGATCTGGTGCGGGGCGAGGGGTTGGCGGCCCTGATCGCCACCCATAATCCCGATCTGGCGCGGCGCATGGACCGC
ATCGTCACCTTGCGCGAGGGCAAGGTGGTGGCCGCCTGA

Protein sequence : 
MSKSPSVSSPQTAPGPQTAPGPQASKVPQAALRLDKVTRSFSQGREVLNVLTGADLAVNPGEIVALVGPSGAGKSTLLQI
CGLLEKPTAGEVRIGGISCGQLSEDRRTLLRRDHLGFVYQYHHLLPEFSAAENIVVPQMIAGIGRKPALARAAELLAKMG
LSERQDHRPGQLSGGEQQRVAICRALANRPKLLLADEPTGNLDPNTAERVFQALLDLVRGEGLAALIATHNPDLARRMDR
IVTLREGKVVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-29 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-29 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F11_08150 YP_006047893.1 ABC transporter NC_008702.1.4606598. Protein 4e-35 43
F11_08150 YP_006047893.1 ABC transporter NC_012469.1.7686878. Protein 7e-38 41