Gene Information

Name : F11_05870 (F11_05870)
Accession : YP_006047441.1
Strain : Rhodospirillum rubrum F11
Genome accession: NC_017584
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1343029 - 1343829 bp
Length : 801 bp
Strand : +
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGATGCTGTGCGCGCGCGATGTCAGCTTCACGATCGATCGGCGAACCATTGTCGACCGGGTTCATCTCGAGGTCGCGGC
CGGCGAGTTCTTCGGCATCGTCGGGCCCAATGGTTCGGGCAAGACCACCCTTTTGCGCATGCTCGCCGGACTGCGGCCGC
CGTCCTCGGGGGTCGTGCTGCTTGGCGGGGTGCCGATGACCGCCCTCGGCCGGCGCGATCTGGCGCAACGCGTCGCCCTG
GTCGAACAACAGGCCGAGACCAGCGAGCGCCTCAGCGCCCGTCAGGCGGTGGAGCTTGGCCGCACCCCCCATCTGAGCGC
GCTTACGCCCTGGTCGCGGCGCGACGAGGCGGTCGTCACGGCGATGATCGACCTTGTCGGAATGGCCGGCTTCGCCGCGC
GCCCCTGGCACAAGCTGTCGGGCGGCGAGCGCCAGCGCCTTCACATCGCCCGGGCGCTGGCCCAGGAACCGCGCCTGCTG
CTGCTCGACGAGCCGACCAATCATCTTGATATCGAGCATCAGATCGGCCTGCTCGCCCTGGTCCGCGCCCTTGGCATCAC
CGTCGTCGCCGTTCTTCACGATCTCAACCACGCCGCCATGTTCTGCGACCGCATCGCGGTGATGCAAGACGGCTTGGTCT
GCGCCGTCGGCCCGCCGCCCGAGATCCTGACCCGTGACCGGCTGGCCGGTGTTTTCAACGTTGACGCCCGCGTCGAGAAC
GATGGCGAGGGCGGCTGTTTCATTCGTTACACGCGACCTTGCCCGGTCCATCCGCGGGTCGCCTTTGGAGACTTCCCATG
A

Protein sequence : 
MMLCARDVSFTIDRRTIVDRVHLEVAAGEFFGIVGPNGSGKTTLLRMLAGLRPPSSGVVLLGGVPMTALGRRDLAQRVAL
VEQQAETSERLSARQAVELGRTPHLSALTPWSRRDEAVVTAMIDLVGMAGFAARPWHKLSGGERQRLHIARALAQEPRLL
LLDEPTNHLDIEHQIGLLALVRALGITVVAVLHDLNHAAMFCDRIAVMQDGLVCAVGPPPEILTRDRLAGVFNVDARVEN
DGEGGCFIRYTRPCPVHPRVAFGDFP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 4e-34 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-35 41
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 9e-34 41
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 9e-34 41
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 2e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F11_05870 YP_006047441.1 ABC transporter BAC0164 Protein 2e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F11_05870 YP_006047441.1 ABC transporter VFG1042 Protein 2e-35 41