|
Name : F11_05065 (F11_05065) Accession : YP_006047280.1 Strain : Rhodospirillum rubrum F11 Genome accession: NC_017584 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : - COG ID : - EC number : - Position : 1167861 - 1169486 bp Length : 1626 bp Strand : + Note : COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase DNA sequence : ATGAGCCAGGAAACGGCCCCGCCGATGGTTCTGTCGGTGCGTGATCTCACCATCGCCCTGCCGCCGGGCGCCGACCGTCC CCATGCGGTCAGCGATATCTCGTTTGACGTGCCGCCGGGCAAGGTGGTCTGCCTGCTTGGTGAATCGGGCTCGGGAAAAT CGGTGATCGCCAGCGCCATCATGGGGCTGCTGCCCCCCGGGCTGCGCCCGGTGAAGGGCGCGATCGAGCTGCGCGGCCAG GCGCTGCTGAGCTGCTCGCAAGCGGCGCTGCGCGCCTTGCGCGGCACGACGATGGCGATGGTCTTCCAAGAACCGATGAC CGCGCTCAACCCGGTGATGACCTGCGGCGCCCAGATCGACGAGATGCTGGCCCAGCATGTCAAACGGCCCAAGGCCGAAC GCCGCGCGGCCATCCTGGCGATCATGGAGCGGGTGCGTCTGCCCGAGCCCGAGCGCATCTATGCGTCTTATCCCCATCAG CTTTCGGGCGGCCAGCGCCAACGCATCGTCATCGCCATGGCGCTGATCCTCAAGCCCGCCCTGCTGATCTGCGACGAGCC GACGACGGCGCTCGATGTCACCACCCAGGCGGAAATCCTCAAGCTGATCCTCGAGCTCCAGCGCGAGAACGGCACGGCGG TGCTGTTCATCACCCATGACTTCGGCGTGGTCGCCGAGATCGCCGACGAGGTGGTGGTGCTGGAACTGGGCGCGATGATC GAAAAGGGCGACAAACACGCCGTGCTGACCGCGCCGCGCCAGCCCTATACCAAGATGCTGCTGGCCGCCGTGCCCGAGCT GTCGCCGCCCGATAGGCCGGCGGTGGAGAACGCCTATCCGCTGCTCCAGGCCAAGGATCTGTGCAAAACCTATGTCAGCG GCGGTTGGCCGGGCAAGCGGCGCGTCGTTCAGGCCGCCAAGGGCGTTTCGCTGATGGTGCGGCCGGGCGAGACCATCGGC ATCGTCGGCGAATCGGGCTCGGGCAAGTCGACGGTGGCGCGCTGCATCGCCCGGCTGATCGACCCGACCTCGGGGGATAT CTTCGCCGACGGCCGCTCGGTCGCCACCGCCACCAAGCGCGAGCTTTCGCCCTTCCGCCGCCATGTTCAGGTTGTGTTCC AAGATCCCTACCGCTCGCTCAACCCCCGCCAGACGGTGGGGGAGTCGATCATCGAGGGACCGGTCAATTTCGGCGTTCCC CGGGCCGAGGCCTGGGCCAAGGCCGAGGAGCTCATGCATTTGGTGCGCCTGAAACCCGATGCCCTGCGCCGCTATCCCAA CGAGTTTTCCGGCGGCCAGCGCCAGCGGATCTCGATCGCCCGGGCGCTCGCCTGCAATCCCAAGGTCTTGATCGCCGACG AGGCGGTGTCGGCCCTTGATGTCTCGGTTCAGGCGCAGATCCTGACCCTGCTCGAAGAGATCCAGGGCCGCCTGCGCATC GGCATCCTTTTCGTCACCCATGATCTGCGCGTCGCCAGTCAGATCTGCGACCATGTCCTGGTGATGTACAAAGGCGAGAT CGTCGAGGAGGGGGCGATCCGCGACGTGTTCTTCGCCCCCCGTCATCCCTATACGCGAAAACTGCTGGCCGCCTCGCCGG GCCGCGATTTCGCCTTCGCCCGGTGA Protein sequence : MSQETAPPMVLSVRDLTIALPPGADRPHAVSDISFDVPPGKVVCLLGESGSGKSVIASAIMGLLPPGLRPVKGAIELRGQ ALLSCSQAALRALRGTTMAMVFQEPMTALNPVMTCGAQIDEMLAQHVKRPKAERRAAILAIMERVRLPEPERIYASYPHQ LSGGQRQRIVIAMALILKPALLICDEPTTALDVTTQAEILKLILELQRENGTAVLFITHDFGVVAEIADEVVVLELGAMI EKGDKHAVLTAPRQPYTKMLLAAVPELSPPDRPAVENAYPLLQAKDLCKTYVSGGWPGKRRVVQAAKGVSLMVRPGETIG IVGESGSGKSTVARCIARLIDPTSGDIFADGRSVATATKRELSPFRRHVQVVFQDPYRSLNPRQTVGESIIEGPVNFGVP RAEAWAKAEELMHLVRLKPDALRRYPNEFSGGQRQRISIARALACNPKVLIADEAVSALDVSVQAQILTLLEEIQGRLRI GILFVTHDLRVASQICDHVLVMYKGEIVEEGAIRDVFFAPRHPYTRKLLAASPGRDFAFAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-81 | 45 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-81 | 45 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-81 | 45 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-81 | 45 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-94 | 43 |
