Gene Information

Name : Spith_0951 (Spith_0951)
Accession : YP_006044942.1
Strain : Spirochaeta thermophila DSM 6578
Genome accession: NC_017583
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1076780 - 1077556 bp
Length : 777 bp
Strand : +
Note : PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP; COGs: COG1338 Flagellar biosynthesis pathway component FliP; InterPro IPR005838:IPR005837; KEGG: sta:STHERM_c09260 hypothetical protein; PFAM: Type III secretion system inner membrane P prot

DNA sequence :
GTGAAACGGATAGGGTTCCTCGTCGTGTTCATGCTCGTCCTTCCGGGTCCGCTCGGGCTCGTGGCGCAATTGGGTCCTGA
AGAGGACCAAGCACTCAATATCCCCTTCGTCGATCTCACCATCCGCGAGCCTCAGAGCGATCAGGAGGTGGCGCTCTCCA
TCCAGCTCCTCCTCCTGCTTACGATACTCACCCTTGCCCCGTCCATCCTCGTCCTTACCACCTCGTTCTTGAGGATCGCC
CTGGTGTTGGACTTCATCCGAAGGGCCCTCGGTCTGCAGCAGGTGCCGCCCACACAGGTGCTCATGGGGATCTCCCTCTT
TCTCACACTGTTCGTGATGTGGCCCACGTTCCAGGAGGTGTACGACGATTCCTTCGTCCCTCTCTCGAGGGGAGAGATAG
ATGTAGAGGAGGCCTACGGCAGGGCGGTCGGCCCTTTGAGGATTTTCATGTACCGGCAGATGCAGAACAACGTGGAGCCC
ATACGACTCTTCATGCGGATGAGCGGTCTTCCCAGGCCCGATACCCTGGCGGATGTGCCCACCCACATCCTCATCCCTGC
CTTCATCCTCCATGAGCTGACCGTGGCCTTCAAGATAGGGATCATACTCTATATCCCCTTTATCATCATCGACATGGTGG
TCGCTTCGACCCTCATGTCGATGGGGATGATCATGCTCCCGCCGGTGATGATCTCCTTCCCGTTCAAGCTGCTCCTCTTC
GTACTCGTGGACGGGTGGACGCTCATCACACAGCAGTTGCTCGGAAGTTTCGTCTGA

Protein sequence :
MKRIGFLVVFMLVLPGPLGLVAQLGPEEDQALNIPFVDLTIREPQSDQEVALSIQLLLLLTILTLAPSILVLTTSFLRIA
LVLDFIRRALGLQQVPPTQVLMGISLFLTLFVMWPTFQEVYDDSFVPLSRGEIDVEEAYGRAVGPLRIFMYRQMQNNVEP
IRLFMRMSGLPRPDTLADVPTHILIPAFILHELTVAFKIGIILYIPFIIIDMVVASTLMSMGMIMLPPVMISFPFKLLLF
VLVDGWTLITQQLLGSFV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL06354.1 EscR Virulence LEE Protein 1e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spith_0951 YP_006044942.1 flagellar biosynthetic protein FliP VFG2338 Protein 4e-35 49
Spith_0951 YP_006044942.1 flagellar biosynthetic protein FliP VFG2016 Protein 2e-30 48
Spith_0951 YP_006044942.1 flagellar biosynthetic protein FliP VFG1259 Protein 2e-32 48
Spith_0951 YP_006044942.1 flagellar biosynthetic protein FliP VFG2494 Protein 6e-34 47
Spith_0951 YP_006044942.1 flagellar biosynthetic protein FliP VFG0044 Protein 2e-22 42
Spith_0951 YP_006044942.1 flagellar biosynthetic protein FliP VFG0394 Protein 9e-22 41