|
Name : Spith_0925 (Spith_0925) Accession : YP_006044916.1 Strain : Spirochaeta thermophila DSM 6578 Genome accession: NC_017583 Putative virulence/resistance : Unknown Product : tyrosine recombinase XerC Function : - COG functional category : - COG ID : - EC number : - Position : 1053352 - 1054251 bp Length : 900 bp Strand : + Note : PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR004107:IPR002104; KEGG: sta:STHERM_c09000 DNA integration/recombination/invertion protei DNA sequence : ATGACTACCGGGCATGAGCGCCTGCTGCGCCGATACCGGACGCATCTCGTTGCAGAGCTGGGGCGTTCGCGCCTCACCGA GGAGACGTATCTACCTCTCTGTGAACGGTTCTGCGCATGGTTGGAGTGCAGGGGATTGGAGGTGGAGACGGTCTCCCGCC GTACGTGTGAGGAGTTCATCGTCGACGAGCGGGGGGAAGGCAAGGAAACCCGCACGATCGCCAAGGAGATGAGCGCCCTC CGATCGTTCTTCAGGTTCCTGGTGCTCGAGGGGGTGCGGCCCGACAACCCGCTCGAGGAGATGGATGCGCCCCGGATCTC GCGGACCCTGCCCCGCGTCCTCGAGGAAGAGGAGGTGGAGATCCTCCTCGAAGCGGTGGATACCACCCCCCCCGAGGGGA TGCGGGACAGATGCCTCCTGGAGGTGCTCTATTCCTGCGGGCTTCGGGTCTCCGAGGCGTGCGGACTCGACCTCCAGGAC ATCTTCCTCTCCGAGGGGTTCGTGAAGGTGCGGGGCAAGGGGGAGAAGGAGCGTCTCGTGCCCTTCGGAAAGGAGGCCGG GCACTGGATGAGGCGATACCTCTCCGAGGCGCGACCGGTCCTGGCGGCACGCCGTCCTGGCTCGCGGGAGCAGGCGGTCT TCCTCAACCGATGGGGACGACGTCTTTCGCGGAAGGGCGCCTGGATCCGACTCAAGAGGCTCGTCGCGGCCAGCGGGGTG GACGCAAAGCTCCACACGTTTCGACACACGTGCGCCACCCACCTGCTCCACGGAGGGGCGAATCTGAGGGAGGTGCAGGA GTTCCTTGGGCATGCCGATATCTCCACGACGCAGATCTACACCCATGTGGACGCCCGTCGCCTCGCATCCTACCATCACA TGTACCACCCAAGGGGGTAG Protein sequence : MTTGHERLLRRYRTHLVAELGRSRLTEETYLPLCERFCAWLECRGLEVETVSRRTCEEFIVDERGEGKETRTIAKEMSAL RSFFRFLVLEGVRPDNPLEEMDAPRISRTLPRVLEEEEVEILLEAVDTTPPEGMRDRCLLEVLYSCGLRVSEACGLDLQD IFLSEGFVKVRGKGEKERLVPFGKEAGHWMRRYLSEARPVLAARRPGSREQAVFLNRWGRRLSRKGAWIRLKRLVAASGV DAKLHTFRHTCATHLLHGGANLREVQEFLGHADISTTQIYTHVDARRLASYHHMYHPRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 8e-44 | 42 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 8e-44 | 42 |
