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Name : Spith_0720 (Spith_0720) Accession : YP_006044716.1 Strain : Spirochaeta thermophila DSM 6578 Genome accession: NC_017583 Putative virulence/resistance : Unknown Product : alpha amylase Function : - COG functional category : - COG ID : - EC number : - Position : 832628 - 834268 bp Length : 1641 bp Strand : + Note : PFAM: Alpha amylase, catalytic domain; COGs: COG0366 Glycosidase; InterPro IPR006047:IPR006589; KEGG: sta:STHERM_c15010 oligo-1,6-glucosidase; PFAM: Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalyti DNA sequence : ATGTCTCGACAGTGGTGGAAAGAGGCGATCGTCTATCAGATCTATCCGCGTAGTTTCATGGACAGCAACGGCGACGGAAT CGGTGATCTGAGAGGGATCATCCAGAGGATCGACTACCTCGTTTCCCTGGGGGTGGACGCCGTGTGGCTCAATCCTGTGT ACCGCTCTCCCAACGTGGACAACGGCTACGACATCAGCGACTTCTTCTCCATCATGGAGGAGTTCGGCAGCATGGAGGAC TGGGAGGAGCTTCTCAGTGCCCTCCATGCGAGGGGCATCCGCCTGGTCATGGATCTGGTGCTCAACCACACCTCGGATCA GCACCCGTGGTTCATCGCCTCCCGATCTTCGCGGGATGATCCCTACCGGCACTACTACATATGGCGCGACCGGCCGAACA ACTGGCGCTCGCTCTTCGAAGGCCCGGCATGGGAGTACGACGAGGCCACGGGGGAGTACTACCTCCACGTCTTCGCCAGG GAACAGCCAGATCTCAACTGGGCGTACCCGCCGCTCAGGGAAGAGCTGTATCGCATGGTCAACTGGTGGCTCGACAAGGG GATAGACGGATTCCGGCTCGACGCGATAAGTGTGATATCAAAACATCCCGATTTCCCCGACGGCGAAGAGGTGGGCCCCG ATGGTCTCGCCCCCGGGACGCCGTACTTCATGAACGGCCCGCACCTCGGGGAGTATCTCGAAGAGCTCTACCGGCGCTGT TTCCATGGGAGGGACGTGCTCACCGTGGGGGAGTGTGCGGGTGTCCACCCGGACGATCTCCCCCATCTCGTAGGCGACGA CAAGGCCCTCAAGAGCATCTTTTTCATGGACCACATGTTCCTCGACCTTGGGCCCGACGGGTACCGATTCGGCAACCCCT ACCCCTATCCCTGGCGGTGGTCGCAGTTCAAGCGCATCGTGCATACCTGGTACCGGGCCTTCTCCCGCGCAGGGTGGATG AGCTTCTACCTGGGCAACCACGACTTTCCCCGCTGTATCTCGCGTTTCGGCTGCGACGGGGAGTACTGGCTCCCCTCGGG CAAGCTGCTCGCCACCCTGCTGCTCACCATGCCGGGGACGATCTACCTCTATCAGGGTGACGAAATAGGGATGACCAATG CCCACTTCACCTCCATAGAGAGCTACCGAGACGTGGAGACCCTCAACTACTACCGACGGGCCATGGAGGAGGGGAGGGAC ACGGGAGAGGTGATGGCCGAGATCATGGCGAGGAGCAGGGACAACGCGCGGACCCCCATGCAGTGGTCATCAGCCCCTCA CGCGGGATTCACCACGGGCGAGCCGTGGATACCGCTCAACCCCAACTATCGAACCATCAACGTGGCTCGGCAGGAGAGCG ACCGCGACTCCCTGCTCTCCTACTACAGGCGGCTCATCCGCATGAGGAAGGAACACGCCGACGTCCTGGTCTACGGCGAC CTCCTGATGCGCGATCTCGACTCGGACCACCTGTGGGTCTACGACCGGACGGCAGGGCACGGTGGATTCAGGATCGTGCT CAACCTCACCCCTGAGGAACAGGAATGGGAAGAAGGGGATGCTGCCCTCGTTCTCTCCTCTCTGGGTGATGCGGAGACCG GAAGGCTCCGACCCTATGAGGCGCGCATCTACAGGATCTAG Protein sequence : MSRQWWKEAIVYQIYPRSFMDSNGDGIGDLRGIIQRIDYLVSLGVDAVWLNPVYRSPNVDNGYDISDFFSIMEEFGSMED WEELLSALHARGIRLVMDLVLNHTSDQHPWFIASRSSRDDPYRHYYIWRDRPNNWRSLFEGPAWEYDEATGEYYLHVFAR EQPDLNWAYPPLREELYRMVNWWLDKGIDGFRLDAISVISKHPDFPDGEEVGPDGLAPGTPYFMNGPHLGEYLEELYRRC FHGRDVLTVGECAGVHPDDLPHLVGDDKALKSIFFMDHMFLDLGPDGYRFGNPYPYPWRWSQFKRIVHTWYRAFSRAGWM SFYLGNHDFPRCISRFGCDGEYWLPSGKLLATLLLTMPGTIYLYQGDEIGMTNAHFTSIESYRDVETLNYYRRAMEEGRD TGEVMAEIMARSRDNARTPMQWSSAPHAGFTTGEPWIPLNPNYRTINVARQESDRDSLLSYYRRLIRMRKEHADVLVYGD LLMRDLDSDHLWVYDRTAGHGGFRIVLNLTPEEQEWEEGDAALVLSSLGDAETGRLRPYEARIYRI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 1e-114 | 45 |
