Gene Information

Name : Spith_0491 (Spith_0491)
Accession : YP_006044488.1
Strain : Spirochaeta thermophila DSM 6578
Genome accession: NC_017583
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 587455 - 588396 bp
Length : 942 bp
Strand : -
Note : PFAM: ABC transporter; COGs: COG1125 ABC-type proline/glycine betaine transport systems ATPase components; InterPro IPR003593:IPR003439; KEGG: sta:STHERM_c17950 transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter

DNA sequence : 
GTGTTTGAGTGTCGGAACCTCGTGAAACGATTCGGAGAAACGGTGGCCCTCGATGGCACTTCCTTCAGCATACCGGAAGG
CCGGCTCACCGTGCTCATAGGCCCCTCGGGGTGCGGCAAGTCCACCACGCTCCGCATCCTCAACCGCCTCATAGAGCCGG
ACGGAGGAGAAGTCCTCTACCGGGGACGCCCCCTCTCCTCATACGATCCGGTGGAGCTCAGACGTTCCATGGGATACGTG
ATCCAGCACATCGGCCTCTTCCCGCACTGGACCGTGGAACGGAACATCTGCACGGTACCCCGGCTCCTGGGGTGGCCCCC
CGAGCGGCAGAGGGCCCGGGCCCTCGAGCTCCTCGAGCTGGTCGGACTCCCTCCCGACGAGTACGCCCGGAAGATGCCAC
ACCAGCTCTCAGGGGGAGAGGCCCAGCGGGTGGGGGTGGCCCGGGCTCTTGCGGCCGATCCACCGGTGATCCTCATGGAC
GAACCCTTCGGTGCGGCCGATCCCCTCACCCGCTCCCGACTCCAGGAGGAGTTCCTCGCGATCCAACGGCGCCTCAGGAA
GACCGTGGTCTTCGTGACCCACGACATGGGAGAGGCCATCCGTCTGGGAGACAGGATCATCCTCATGCGGGAAGGCCGCG
TGGTGAGGGAAGCGGCCACCGAGGATCTCGTGCGCTCGGGCGACGGGTTCGTGAAGACCTTCCTGGGCTCGGAGAGCGTG
CTCCTCCTCCTCGAGTGCCATACGATGGAGGAAATCGCACGCCCTGCACCCCCCACGATCCCGGAAGAACTGCCCCGTGT
TCCCGGTGCTGCCACGGTGAGGGATGGGCTTTCCCTTCTCCTGGAGAGCGGGGCTCCGATGCTCGCGGTGGAGGAGCAAG
GCGGGATCCTGGGTATCGCAGGACTCAAGGAGATCCAGGCGCTCGTCCGGAGGGGCAGATGA

Protein sequence : 
MFECRNLVKRFGETVALDGTSFSIPEGRLTVLIGPSGCGKSTTLRILNRLIEPDGGEVLYRGRPLSSYDPVELRRSMGYV
IQHIGLFPHWTVERNICTVPRLLGWPPERQRARALELLELVGLPPDEYARKMPHQLSGGEAQRVGVARALAADPPVILMD
EPFGAADPLTRSRLQEEFLAIQRRLRKTVVFVTHDMGEAIRLGDRIILMREGRVVREAATEDLVRSGDGFVKTFLGSESV
LLLLECHTMEEIARPAPPTIPEELPRVPGAATVRDGLSLLLESGAPMLAVEEQGGILGIAGLKEIQALVRRGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-45 47
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 8e-46 47