Gene Information

Name : Spith_0387 (Spith_0387)
Accession : YP_006044389.1
Strain : Spirochaeta thermophila DSM 6578
Genome accession: NC_017583
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 471671 - 472411 bp
Length : 741 bp
Strand : +
Note : PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: sta:STHERM_c04220 3-oxoacyl-[acyl-carrier-protein] reductase; PFAM: Short-chain dehydrogena

DNA sequence :
ATGAAACTCAAGGATAGAGTGGCGTTGGTGACGGGATCGGCCCGGGGGATCGGCCGGGCCGTCGCCCTGCGGCTCGCCCA
GGAAGGGGCGGGTGTGGGGATCATGGATCTCAAAGGCACCGAGGAGACCGCGCAGGAGTTCTCCTCCATGGGCTACAAGG
CCGTGCCCCTCCCCGCAGACGTGACCAGGTACGAGGAGGTCGCCTCTGCGGTGGAGAAACTGGTGGAGGCCTTCGGAAAG
GTGGATATCCTCGTGAATAACGCGGGTATCATCGTACGGGGACACGTGCTCGATCTTTCCCTCGAGGAGTGGCGCAAGGT
GATCGACGTGAACCTCCACGGCACGTTCCACTGCTGCAAGGCCGTCCTGCCGTACATGGTGAAGCAGAACTATGGGCGTA
TCGTGAACATCACCTCCATCGCCGGGAAGGTGGGGGACATCACCGCGGCCCCTGCCTACGGAACCTCGAAGGGAGCGGTG
AACACCCTCACCAAGTCCCTCGCACGCCAGCTCGCGGACTACGGGATCACCGTAAATGCGGTGGCACCCCATGCCATCGA
GACCGACATGAGTGCCCAGTGGACCCCTGAACAGCGGAAGGCCGTGATAGATGCGATCCCCCTCAAGCGCCTGGGTAAGC
CGGAGGAAGTGGCCGAGGCCGTGGTCTTCCTGGTGAGCGAAGGGGCTTCGTTCATCACAGGGGAGATACTCGACGTGAAC
GGCGGCTATCTCATGGACTAG

Protein sequence :
MKLKDRVALVTGSARGIGRAVALRLAQEGAGVGIMDLKGTEETAQEFSSMGYKAVPLPADVTRYEEVASAVEKLVEAFGK
VDILVNNAGIIVRGHVLDLSLEEWRKVIDVNLHGTFHCCKAVLPYMVKQNYGRIVNITSIAGKVGDITAAPAYGTSKGAV
NTLTKSLARQLADYGITVNAVAPHAIETDMSAQWTPEQRKAVIDAIPLKRLGKPEEVAEAVVFLVSEGASFITGEILDVN
GGYLMD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 3e-36 41
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 2e-36 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 2e-36 41