Gene Information

Name : Spith_2286 (Spith_2286)
Accession : YP_006046258.1
Strain : Spirochaeta thermophila DSM 6578
Genome accession: NC_017583
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2548909 - 2549586 bp
Length : 678 bp
Strand : -
Note : PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: sta:STHERM_c22460 transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter rel

DNA sequence :
ATGGCGCTCGTAGAGCTTTACGAGGTGCACAAGGACTATCACCTTGGAAGGACGGTGGTGCATGCACTGAGGGGAGTGAC
TCTGGAGATCGCCCAGGGGGAGTTCGTGGCCCTGATGGGTCCCTCCGGATGCGGGAAGACCACCCTTCTCAACATCGTGG
GGTGTATCGATAGACCCACCTCGGGACGTGTGTTGTTTGACGGCACCGACGTGGCGGGGCTCTCGGACGACGAGGAGGCT
CGGATGAGGAGGGAGCACATAGGATTCATCTTTCAGAGTTTCAACCTCATACCGGTGCTCACCGTGGCGGAGAACGTGGA
GATCCCCCTCGTGCTCGAGAGACGGCCGAGGGATGAGAGGAAGAGGAGGGTCGAGGAGCTCCTCGCCCTCGTGGGACTTT
CCGAGTACGCCTCCCACCGGCCGGACGAGCTTTCTGGGGGACAGCGGCAGCGGGTGGCGATCGCCAGGGCGCTCGTCCAC
AACCCCCGTCTCGTCATCGCAGACGAGCCCACGGCCAATCTCGATTCCGAGACCGGAAAGGGGATTCTCGAAGAGATGCG
TCGTCTTAACCGGGAGGAGGGGGTGACCTTCATCTTTTCGACGCATGACCACGAGGTCATGCGGTTCGCGGAAAGGGTCG
TTCACCTGAAGGACGGGAGGATCCATGATGTTCCTTAA

Protein sequence :
MALVELYEVHKDYHLGRTVVHALRGVTLEIAQGEFVALMGPSGCGKTTLLNIVGCIDRPTSGRVLFDGTDVAGLSDDEEA
RMRREHIGFIFQSFNLIPVLTVAENVEIPLVLERRPRDERKRRVEELLALVGLSEYASHRPDELSGGQRQRVAIARALVH
NPRLVIADEPTANLDSETGKGILEEMRRLNREEGVTFIFSTHDHEVMRFAERVVHLKDGRIHDVP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 7e-26 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-29 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spith_2286 YP_006046258.1 ABC transporter NC_008702.1.4606598. Protein 4e-40 51
Spith_2286 YP_006046258.1 ABC transporter NC_012469.1.7686878. Protein 2e-41 46
Spith_2286 YP_006046258.1 ABC transporter CP001581.1.gene798.p Protein 3e-38 42
Spith_2286 YP_006046258.1 ABC transporter NC_012469.1.7686946. Protein 4e-22 42