Gene Information

Name : Spith_0193 (Spith_0193)
Accession : YP_006044197.1
Strain : Spirochaeta thermophila DSM 6578
Genome accession: NC_017583
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 241015 - 241704 bp
Length : 690 bp
Strand : -
Note : PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: sta:STHERM_c02090 ATP-binding/permease MacB; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC t

DNA sequence :
ATGGCGATCGTTGAACTTTCCGGAGTGAAGAAAGACTACCACACGGGAGAGACCGTGGTACACGCCCTGAGGGGGGTGGA
CATCCAGGTGGAACCGGGCGAGTTCCTCGCCATCGCCGGACCCTCGGGTTCGGGCAAGACCACCCTCCTCAACATCATCG
GCACCCTCGATTCCGCGGACGAGGGGACGGTGATCATCGACCACACCGATATCCCGTCCCTCGATCCGAAGGAGCGAGCC
CGCTTCAGACGCGGAAAGATCGGCTTCGTCTTCCAGACCTTCAACCTCATCCCCGTGCTCACGGCCTACGAGAACGTGGC
CTTCGCCCTCGACCTCCTCGACCTTCCTGAACGCGAGGTGAGGGAGCGCACCATGCAGATCCTCAAGGACGTGGGGCTCG
AGGGCATGGAGGACAGGAGACCGGCCCAGCTCTCGGGTGGTCAGCAACAGCGCGTGGCCATCGCCAGGGCCCTGGTGAAG
AATCCCATCCTCGTCCTGGCCGACGAGCCCACCGCCAACCTCGACTCCGAGACCGGAAAGGCCATCGTCCACCTCATGCA
GGAGCTCAACGAGAAGTACGGCACCACCTTCATCTTCTCCACCCACGACAAGATGGTGATGGACCACGCCCGCAGGCTCG
TGCTCCTGCACGACGGACTCATCCAGGAAGACATAAGGAGGGAGTCATGA

Protein sequence :
MAIVELSGVKKDYHTGETVVHALRGVDIQVEPGEFLAIAGPSGSGKTTLLNIIGTLDSADEGTVIIDHTDIPSLDPKERA
RFRRGKIGFVFQTFNLIPVLTAYENVAFALDLLDLPEREVRERTMQILKDVGLEGMEDRRPAQLSGGQQQRVAIARALVK
NPILVLADEPTANLDSETGKAIVHLMQELNEKYGTTFIFSTHDKMVMDHARRLVLLHDGLIQEDIRRES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-35 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-36 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-36 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spith_0193 YP_006044197.1 ABC transporter NC_008702.1.4606598. Protein 7e-46 49
Spith_0193 YP_006044197.1 ABC transporter CP001581.1.gene798.p Protein 2e-41 44
Spith_0193 YP_006044197.1 ABC transporter NC_012469.1.7685735. Protein 9e-37 42
Spith_0193 YP_006044197.1 ABC transporter CP001581.1.gene598.p Protein 2e-40 41
Spith_0193 YP_006044197.1 ABC transporter NC_012469.1.7686878. Protein 1e-38 41