Gene Information

Name : Spith_1837 (Spith_1837)
Accession : YP_006045813.1
Strain : Spirochaeta thermophila DSM 6578
Genome accession: NC_017583
Putative virulence/resistance : Virulence
Product : family 2 glycosyl transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2060598 - 2061542 bp
Length : 945 bp
Strand : +
Note : PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: sta:STHERM_c17660 glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase family 2

DNA sequence :
ATGATCTCGATCATCATCCCCGTGTACAACGAAGAGGAGGTGCTCCCGGCCCTCTACGAGCGGCTCACCCGCGTCATGAA
GGGCACCGGGGAAGAGTACGAGCTCGTCTTCGTGGACGACGGGAGCACCGATCGCACCTACCAGATCCTCAAAAACCTCC
ATGAGAAAGACCCCCGCTGCAAGGTCATCCACTTCTCCCGCAACTTCGGCCACCAGATCGCCATCACTGCGGGCATGGAC
TACGCCCGAGGGGACGCCGTGATCATCATCGACGCGGACCTCCAGGACCCGCCCGAGCTCATCCCCCAGATGCTCGAGAA
ATGGCGAGCGGGGACACAGATCGTCCATGCCCGGAGGGTGAAACGCAAGGGGGAAGGGCTCTTCAAACGCGCGACCGCCG
CCCTGTTCTACCGGATCCTCAAAGCCCTCACCGACGTGGAGATCCCGGTGGATGTGGGAGACTTCAGGCTCATGGACCGG
AAGGTGGTGGACTCGCTCAAAGGGATGCGGGAACGCAACCGGTTCGTGCGGGGCCTGGTGAGCTGGACGGGATTCAGGCA
GGACGAGGTCACCTATGTGCGCGACCCGCGCTACGCAGGAACCACGAAGTACCCGCTCGGGAAGATGATCCGCTTCGCCC
TCAACGGGATCACCTCGTTCTCGGACAAGCCCCTCAAGGTTGCGAGCCTCCTGGGCAGTCTCCTCTCCCTCGCGGGCTTT
CTCTACCTCCTCTACGTGCTCTACCTCAGGCTCTTCACCGATCAAGTGGTCCAGGGATGGGCGAGCATCGTGGTCCTCAT
ACTGGTATTCAACGGCTTCACCCTCCTGTCCCTCGGGATCCTGGGCGAGTACGTGGGAAGGATCTACGACGAAGTGAAGC
AACGCCCCCTCTACATCGTGGAGGAGACGCTGGGGGTGGAACAGAAGGAGATCCGGCATGGATGA

Protein sequence :
MISIIIPVYNEEEVLPALYERLTRVMKGTGEEYELVFVDDGSTDRTYQILKNLHEKDPRCKVIHFSRNFGHQIAITAGMD
YARGDAVIIIDADLQDPPELIPQMLEKWRAGTQIVHARRVKRKGEGLFKRATAALFYRILKALTDVEIPVDVGDFRLMDR
KVVDSLKGMRERNRFVRGLVSWTGFRQDEVTYVRDPRYAGTTKYPLGKMIRFALNGITSFSDKPLKVASLLGSLLSLAGF
LYLLYVLYLRLFTDQVVQGWASIVVLILVFNGFTLLSLGILGEYVGRIYDEVKQRPLYIVEETLGVEQKEIRHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 2e-47 45
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 9e-49 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spith_1837 YP_006045813.1 family 2 glycosyl transferase VFG0670 Protein 1e-48 45