Gene Information

Name : Spith_1783 (Spith_1783)
Accession : YP_006045759.1
Strain : Spirochaeta thermophila DSM 6578
Genome accession: NC_017583
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1999642 - 2000547 bp
Length : 906 bp
Strand : +
Note : PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1; COGs: COG0214 Pyridoxine biosynthesis enzyme; HAMAP: Pyridoxal biosynthesis lyase pdxS; InterPro IPR001852; KEGG: sta:STHERM_c17110 pyridoxine biosynthesis protein; PFA

DNA sequence :
ATGAGCGAGAAGCTGTGGTCCGAACGTCAGACTGCGACCTGGCGCACCAAGGTGGGGCTCGCCGAGATGCTCAAAGGCGG
GGTCATCATGGATGTGGTGACGCCGGAGCAGGCGCGTATCGCGGAGGATGCAGGAGCTGCGGCGGTGATGGCGCTCGAGA
GGGTGCCTGCAGATATCCGCGCCCACGGTGGGGTGGCGCGCATGTCCGATCCCGAGATCATCATCCGGATCCAGGAGGCG
GTCTCCATCCCGGTGATGGCGAAGTGCCGCATAGGACACTTCGTCGAGGCACAGATCCTGGAGGCCCTGGGGGTCGACTT
CATCGACGAGAGCGAGGTGCTCACCCCTGCAGACGAGGAGCACCACATCTGGAAGCACGATTTCAAGGTGCCGTTCGTGT
GTGGGTGCCGCGATCTGGGCGAGGCCCTCAGGCGGATAGGCGAGGGTGCGGCCATGATCCGTACCAAGGGAGAGGCCGGC
ACGGGCGACGTGGTGGAGGCGGTTCGACACATGCGCGCGGTGATGAACGGGATACGCAGGCTCACCACCTTGAGCGACGA
ACAGCTCATGACCGAAGCGAAGCGTCTGGGCGCTCCGTTCGACGTGCTGCACGAGGTGGCGAAGACCGGCAAGCTCCCGG
TACCCAACTTCTCCGCCGGAGGCATCGCCACCCCGGCCGATGCCGCGCTCATGATGCAGCTCGGGGCCGAGGCCGTCTTC
GTGGGCTCCGGGATCTTCAAGTCGGAGAATCCTGCCAAACGGGCCAAGGCCATCGTGGAGGCCGTCACCTACTACAACGA
CCCGAAGAAGCTCGCCGAGATCTCCCGGGGGTTGGGCGAGCCCATGCACGGGATCGAGGTGCGCACCATCGAAGAGGGCA
GACAGCTCGCACAGCGAGGCTGGTGA

Protein sequence :
MSEKLWSERQTATWRTKVGLAEMLKGGVIMDVVTPEQARIAEDAGAAAVMALERVPADIRAHGGVARMSDPEIIIRIQEA
VSIPVMAKCRIGHFVEAQILEALGVDFIDESEVLTPADEEHHIWKHDFKVPFVCGCRDLGEALRRIGEGAAMIRTKGEAG
TGDVVEAVRHMRAVMNGIRRLTTLSDEQLMTEAKRLGAPFDVLHEVAKTGKLPVPNFSAGGIATPADAALMMQLGAEAVF
VGSGIFKSENPAKRAKAIVEAVTYYNDPKKLAEISRGLGEPMHGIEVRTIEEGRQLAQRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-93 72
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-93 72
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-93 72