Gene Information

Name : Spith_1782 (Spith_1782)
Accession : YP_006045758.1
Strain : Spirochaeta thermophila DSM 6578
Genome accession: NC_017583
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1998817 - 1999509 bp
Length : 693 bp
Strand : -
Note : PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR011078:IPR001608; KEGG: sta:STHERM_c17100 pyridoxal 5'-phosphate-dependent enzyme; PFAM: Alanine racemase

DNA sequence :
ATGAGGGAGCGGGAGGAACACATACGACGCATCCTCGACGAGGTGAGGGAACGGTGCGTGAAAGCGGGGAGGCGGCCGGA
GGAGGTGCGGGTGATGGCCGTCACCAAGCTCCACGGCCCTGAGGCGATTGCAGACGCCTACCGTGCGGGCATCAGGCTCT
TCGGCGAGAACAGGCTCCAGGAGGCCGCCTCCAAGCGAGAGGCCTTTCCCCCCGATGCCGAGCTCCACCTCATCGGCCAC
CTCCAGCGCAACAAGGCCAGGAAGGCGGTGGAGCTCTTCTCCTGCATCCACTCGGTCGATCGCATCCCCCTCATCGAGGC
CCTGGAGAAGGCGTGGGGGGATCGGGAAGGGAGGCTCCCTGTGCTCGTCGAGGTGAACCTCTCAGGGGAGGAGACCAAGT
ACGGGTTCCGCACCGAGGAAGAGGTGGCCCAGGCCCTCGAGCGCCTCGCCGCAAGTCCCGCCCTCGAGGTGCGGGGCTTC
ATGACCATGGCGCCCTACACCGACGACGAGAGGGTGATCCGGGCCGTGTTCGGGGGCCTGCGCGAGCTGGCCTCTCGTAT
GCAGAAGGCCTTCCCCTCGCTCCCCCTCGCCGAACTCTCCATGGGCATGAGCAACGACTATCCCATCGCGATCGAGGAGG
GGAGCACCATCCTCCGCCTGGGTACGGTGCTCTTCGGGGAGCGTGCCCCGTGA

Protein sequence :
MREREEHIRRILDEVRERCVKAGRRPEEVRVMAVTKLHGPEAIADAYRAGIRLFGENRLQEAASKREAFPPDAELHLIGH
LQRNKARKAVELFSCIHSVDRIPLIEALEKAWGDREGRLPVLVEVNLSGEETKYGFRTEEEVAQALERLAASPALEVRGF
MTMAPYTDDERVIRAVFGGLRELASRMQKAFPSLPLAELSMGMSNDYPIAIEEGSTILRLGTVLFGERAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 8e-27 42
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 8e-27 42
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 8e-27 42
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 8e-27 42