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Name : Spith_1648 (Spith_1648) Accession : YP_006045626.1 Strain : Spirochaeta thermophila DSM 6578 Genome accession: NC_017583 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : - COG ID : - EC number : - Position : 1851365 - 1852642 bp Length : 1278 bp Strand : - Note : PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681:IPR010656; KEGG: bcl:ABC4044 TRAP-type transport system permease large protein; P DNA sequence : ATGACAAGGGTTATGTTCATCGTATTTATCATCCTTCTCCTGCTAGGGATTCCTATTGCCTTTGTTATCGGAATCAGTAG TTTAGTATACATCCTGAGAGAGGGAATGCCTCTGGTTCTTTTAGCCCAGAGGTTCTATGTGAGTGTTACCAATTATCTCA TTCTCTCTGTACCTATGTTTATCTTAGCAGGGAAGCTCATGAACGAGTCGGGGATTACCCGACGGCTGGTGGATTTCTTT AACATGATCCTGGGCCATATCCGGGGTGGATTAGCCTATATCACTATCGTGGCGAGTCTTTTCTTTGCAGGTATCACAGG GGCAGGAGCGGCGGATGCCGCAGCTATTGGAGCCATCATGATTCCTGCGATGAAGAAAGAGGGATATTCGGCTGAGTATA GCGGAGCAGTGACAGCCGTAGCCTCTATCATCGGTCCTACAATTCCTCCAAGCATTGCCATGGTGATTTATGGAGCGAGT GCGGGGGTCTCTATTGCGAAGTTATTTCTAGGAGGGATTATCCCCGGGATACTCATCGGCATAGCACAGTTAATTGTCGC ATACGTATATAGCAAAAAGCATGATGTTCCTGTCAAGGCGAGGAATATTTCTTTTGCCGGTATAACTCGAGGTTTGAAGG ACGCCATTCTCGCATTGCTGATGCCGGTGATCCTACTCGGAGGAATATTATCCGGAATATTCACTCCAACAGAGGCTGCG GGAGTCTCCGTGCTGTATGCAGTGGTGGTGGGCTTTTTTGTGTTTCGGGAATTGAATCTGAAGAAATTGTTTCACTCCTT ATACGAAACGGCGCTGGTCACTGCAACGATATTGTTTATTCTCGCCTTTGCCCACCTGTTCGGCTGGATTCTTTCCGCAG AGGATGTTCCCGATAAAGTGGCACAGGTTTTCATTCATATTACAAACAATCGTTTCTTGTTACTCTTGCTCATAAATATT CTTTTCCTGATAGTTGGTACCTTCATGGAAACTCTTGCCTCCGTCATATTGCTTACCCCTGTGCTGCTCCCTCTCGCCCA GAGCATAGGGCTTGATCCTGTTCACTTTGGGGTAATGATGGTGGTGGCGCTCAATATCGGATTGGTGACTCCTCCATTGG GGGTATGCCTCTTTGTTTCTGCTCCCATTGCAGGGGTATCTGTGGAGCGTCTTGTACTATCATGTCTTCCATTCATTTTT GCCTCCATTGTTGTGTTATTGCTGATTACCTATATACCTTCACTGGTGATGTTTATTCCAAACCTGGTGGTGAAATAA Protein sequence : MTRVMFIVFIILLLLGIPIAFVIGISSLVYILREGMPLVLLAQRFYVSVTNYLILSVPMFILAGKLMNESGITRRLVDFF NMILGHIRGGLAYITIVASLFFAGITGAGAADAAAIGAIMIPAMKKEGYSAEYSGAVTAVASIIGPTIPPSIAMVIYGAS AGVSIAKLFLGGIIPGILIGIAQLIVAYVYSKKHDVPVKARNISFAGITRGLKDAILALLMPVILLGGILSGIFTPTEAA GVSVLYAVVVGFFVFRELNLKKLFHSLYETALVTATILFILAFAHLFGWILSAEDVPDKVAQVFIHITNNRFLLLLLINI LFLIVGTFMETLASVILLTPVLLPLAQSIGLDPVHFGVMMVVALNIGLVTPPLGVCLFVSAPIAGVSVERLVLSCLPFIF ASIVVLLLITYIPSLVMFIPNLVVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 1e-47 | 42 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 1e-47 | 42 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 1e-47 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Spith_1648 | YP_006045626.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 6e-48 | 42 |
