Gene Information

Name : Spith_1645 (Spith_1645)
Accession : YP_006045623.1
Strain : Spirochaeta thermophila DSM 6578
Genome accession: NC_017583
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1848747 - 1849520 bp
Length : 774 bp
Strand : -
Note : PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: ote:Oter_1273 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/redu

DNA sequence :
ATGATGGATGTACATAGTCTTTTCCGTCTTGATGGTCGTGTGGCTCTTGTGACTGGATCCAGTCAGGGACTGGGGAAGAT
GCTTTCTAGGGGGTTGGCTTCCGCTGGAGCCCGAGTGGTGCTCAATGGGAGAGATCCGAAGAAGCTGGAAAGAGCAGTAG
AGGAGTTCCTTAGTGAAGGGTATGATGCTTGCGGATATGCCTTTGATATCACGAAACGCCATGAAATAGATACTGCCGTC
GAACGAATCGAGTCAGAGATAGGACCCATTGACATTCTCGTGAATAATGCGGGTATCCAGCGACGAGCTCCACTACACGA
AGTGACGGATGAAATCTGGGACGAGGTACTCGCTACGAACTTGACTGGAGCCTTTCTGGTGACTCGAAAAGTGGCCCGGG
GTATGATTCAGCGACAGCGGGGAAAGGTCATCTTCATCTGCTCCTTGATGTCTGAGCTGGGTCGTCCCACTACAGGGCCG
TACGCTGCTGCAAAAGGGGGAGTACGGATGCTGATGGGATCCATGTGCGTGGAGTGGGCTCAGTACAATATTCAAGTCAA
TGGGATCGGTCCAGGATACTTCATCACGGAGATGACAAAATCTCTGGCGGAAGATCCCTCATTCAATGACTGGCTCATAA
ACAGAACTCCTGCCCGACGGTGGGGGGATCCAAAGGAGTTGGTGGGGGCGCTTCTTCTCCTCGCCAGTGATGCGGGAAAC
TTCATCAATGGGCAGATTATTTATGTGGATGGGGGGATTTTAGCGGCACTGTGA

Protein sequence :
MMDVHSLFRLDGRVALVTGSSQGLGKMLSRGLASAGARVVLNGRDPKKLERAVEEFLSEGYDACGYAFDITKRHEIDTAV
ERIESEIGPIDILVNNAGIQRRAPLHEVTDEIWDEVLATNLTGAFLVTRKVARGMIQRQRGKVIFICSLMSELGRPTTGP
YAAAKGGVRMLMGSMCVEWAQYNIQVNGIGPGYFITEMTKSLAEDPSFNDWLINRTPARRWGDPKELVGALLLLASDAGN
FINGQIIYVDGGILAAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 2e-28 43