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Name : Spith_1489 (Spith_1489) Accession : YP_006045469.1 Strain : Spirochaeta thermophila DSM 6578 Genome accession: NC_017583 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : - COG ID : - EC number : - Position : 1671718 - 1673016 bp Length : 1299 bp Strand : + Note : PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: sta:STHERM_c13530 transporter; PFAM: TRAP C4-dicarboxylate trans DNA sequence : ATGCCTGATACAGGGATCGCCACATTCCTCCTGTTGGGCACCTTTCTCGTGCTCATCATCCTGAGAGTTTCCATCTCATT CGCACTCGCCCTGGCGGCCATCGTGACGGGCATATATCTCAAGGTTCCCCTCATGTCGGTGGTCCAGCAGATGGTCCACG GCATCAAGTCCTTCTCTCTCCTGGCCATTCCCTTCTTCATACTGGCCGGAGAACTCATGGGACAGGGAGGAATATCCAAG CGTCTCATCAAGTTCTCGAACCTCATCGTAGGCAGACTTCCCGGAGGCCTCGCCCAGGTCAACATCCTCGCCAGCATGTT CTTCGGAGGCATCTCGGGGTCTGCGGTGGCCGACATCTCCTCCATAGGAACTATACTCATCCCCATGATGAAGGAGAACA AGTATGACGAGGACTTCTCGGTGGCCATCACCGTGACCAGCGCATGCCAGGGGATCATCATTCCTCCGAGTCACAACATG ATCATCTTCTCCCTGGCTGCAGGAGGAGTATCCATAGGAAGGCTCTTCCTTGGAGGGTACCTGCCGGGGGTGATACTCGG GCTCGCTCTCATGATCATCACCCATTTCATCTCGATCAAACGGGGATATCCGAGAGAGCGGTGGTACTCCTTTCGGGAGG CCCTCGCCATCACCGGAGAGGCTTTCATGGGGCTCATGACGGCCGTCATCATCATCGTGGGTGTGGTCTCCGGGGTGTTC ACCGCCACCGAGTCGTCTGCCGTGGCCGTGGTGTGGGCCTTCGTGGTCACCTTTTTCGTCTATCGCGAGATTCCGCTGAG AAAATTCCCGAGGATTCTCTACAGCTCATTGAAGACCCTTGCGATGGTGATGGCCCTCATCGCATCCGCGAGCGCCTTCG GCTGGTTCATGGCCTACCTGAGGATACCCGCCAAGGCCACGGAACTCCTCTTGAGCATCACCACGAGCAAAGTACTTCTG CTCCTGCTCATCAATGTACTGCTTCTTTTGCTCGGCATGATCATGGACATGGCCCCACTCATCCTCATCACCACGCCCAT TCTCTACCCGGTGGTGGTGGATACACTGGGGATGTCGCCCATTCAGTTCGGCGTGATGCTGGTACTCAACCTCGCCATAG GACTCACCACTCCGCCAGTGGGATCCGCCCTCTTCGTGGGGTGTGCGGTGGGCAAGATCCCCATAGAGAAGGTGGTGCGC ACCATGTTCCCACTGTGGCTGGTGATGGTTACGGTGCTCCTCCTGGTTACCTTCTTCCCGCCGCTCACCACCACCCTCCC TGGAATCTTCATGCCATGA Protein sequence : MPDTGIATFLLLGTFLVLIILRVSISFALALAAIVTGIYLKVPLMSVVQQMVHGIKSFSLLAIPFFILAGELMGQGGISK RLIKFSNLIVGRLPGGLAQVNILASMFFGGISGSAVADISSIGTILIPMMKENKYDEDFSVAITVTSACQGIIIPPSHNM IIFSLAAGGVSIGRLFLGGYLPGVILGLALMIITHFISIKRGYPRERWYSFREALAITGEAFMGLMTAVIIIVGVVSGVF TATESSAVAVVWAFVVTFFVYREIPLRKFPRILYSSLKTLAMVMALIASASAFGWFMAYLRIPAKATELLLSITTSKVLL LLLINVLLLLLGMIMDMAPLILITTPILYPVVVDTLGMSPIQFGVMLVLNLAIGLTTPPVGSALFVGCAVGKIPIEKVVR TMFPLWLVMVTVLLLVTFFPPLTTTLPGIFMP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 4e-45 | 41 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 4e-45 | 41 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 3e-45 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Spith_1489 | YP_006045469.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 2e-45 | 41 |
