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Name : Spith_0122 (Spith_0122) Accession : YP_006044126.1 Strain : Spirochaeta thermophila DSM 6578 Genome accession: NC_017583 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : - Position : 148829 - 150799 bp Length : 1971 bp Strand : + Note : PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast; COGs: COG0021 Transketolase; InterPro IPR005474:IPR005475:IPR005476:IPR00547 DNA sequence : ATGGACAGGAAAGCTCTGGAGAAGATAGCGCTCTCGGTACGGAGTCTCTCCATGGACGCGGTGGAGGCGGCCAAGTCGGG ACATCCTGGCCTTCCTCTGGGTGCGGCAGAGATAGGTGCGGTGCTCTTCGGGGAGGTGCTCAGGCTCTCGCCTCATGATC CGGCCTGGATCAATCGTGACCGGTTCGTCCTCTCGGCAGGTCATGGTTCCATGTGGCTCTACTCACTCCTCCATCTCGCC GGTTTCGATCTCCCCTTGGACGAGATCAAACGGTTCCGCCAGCTCGGTTCCAAGACGCCGGGGCATCCGGAGTACGGTCA CACGGCCGGGGTGGAGACCACCACGGGCCCCCTCGGGCAAGGGTTTGCGAACGCGGTGGGCATGGCCATCGCGCAGGAGA TGCTCGCCGCCAGGTTCAACACTCCGGAGTTTCCCCTCATCGATCACTACGTGTACGCCCTTGCAGGCGACGGCTGTCTC ATGGAGGGGGTGAGCGCAGAGGCCGCCTCACTCGCGGGGCACCTCAAGCTCGGCAGGCTCATCGTGTTCTACGATTCGAA CCGTATCACCATAGAGGGTGAGACCGACCTCGCCTTCACCGAGGATGTGGGTGCTCGTTTCGGTGCGTATGGCTGGCAGG TCCTGGAAGGCGACGGGTACGACATGGAGGGGATCCTCTCCCTGGTCGAGGAGGCAAAGGCCGAACGGGAACGCCCGACG CTCATCATCCTTCACACCACGATCGGGAAAGGCGCTCCGAACAAGGCCGGTTCCCACGAGGTACACGGCGCTCCGTTGGG GTCCGAGGAGGTGAAGGCTTCGAAACGGGCCCTGGGAATCCCCGAGGACGCGCAGTTCTACGTGGCACCCGAGGCCTACG CCTACTTCGAGGAACGACGGAAGGCCTGGAGGGAGGAGTACGACAGGTGGCAGCGGATGTTCTCCGACTGGGCGCGCACG TACCCCGAGAAGAAGGCGGAATGGGACAGGTTCTTCGGCCCGGTCGATCTCTCGAAGGTGAGCTTCCCCTCTTTCGAGCG TGGGAGCAAGGTGGCGACCAGAAAGGCGAGCGGCGAGGTGCTCAAGGCCCTTGCCGCAGGTGTCCCGAACCTGGTGGGCG GGTCCGCGGATCTCGCGCCGTCCAACAACACGGCCCTCCCCGGATATGGGGACTTCAGCGTCGGGGATCGTACGGGGAGG ACCCTCCACTACGGGGTGAGGGAGCACGCCATGGGTGCCGTGGCGAACGGCATCGCCCTCTATGGTGGATTGAGGACCTT CTGCGCCACCTTCCTGGTCTTTTCGGACTACATGCGTCCCCCCATCAGGCTCGCCGCCCTCATGGGGCTCCCCGTGACGT ACATCTTCACCCACGACTCGATCTTCGTCGGAGAGGACGGCCCGACCCACCAGCCGGTGGAGCACCTGGCCTCCCTCCGT GCCGTTCCCAACCTCCTGGTGCTGAGGCCGGGGGATGCGGAGGAGACGGTGCTGGCCTGGAGGCTCGCCATGGAGAGCGC CTCCACCCCGGTGGTGCTCGCCCTCTCACGGCAGGGACTGCCCGTCTACGAGAAGCCTGCAGCCTGGGAAGAGGACGCAC GGCGTGGGGCTTACGTGGTGAAGGACTGCGAGGGCACCCCCGATGTGGTGGTGGTGGCCACCGGGTCCGAGGTTTCGCTC GCCCTTGCGGCCGCAGGAGAGGCGGAGGGAAGGCGGGTCAGGGTGGTCTCCATGCTTTCGAGGGAGCTCTTCCTCTCACA GGACGAAGCCTTCCGGGAGAGGATCGTTCCCCGCGATGTGAGGACCGTGGTGGTGGAAGCCGGTGTGGCCCTCGGGTGGG AGGGGTTCGTCTCCCGGAGGGACGACCTCGTCACCCTGGATCGATTCGGCCTGTCCGGTCCCGGGGGCCAGGTGGCCGAG GCGCTCGGCCTCTCGAAGGAGCGGGTGAAGCAGAGGATCATGGGGCAATGA Protein sequence : MDRKALEKIALSVRSLSMDAVEAAKSGHPGLPLGAAEIGAVLFGEVLRLSPHDPAWINRDRFVLSAGHGSMWLYSLLHLA GFDLPLDEIKRFRQLGSKTPGHPEYGHTAGVETTTGPLGQGFANAVGMAIAQEMLAARFNTPEFPLIDHYVYALAGDGCL MEGVSAEAASLAGHLKLGRLIVFYDSNRITIEGETDLAFTEDVGARFGAYGWQVLEGDGYDMEGILSLVEEAKAERERPT LIILHTTIGKGAPNKAGSHEVHGAPLGSEEVKASKRALGIPEDAQFYVAPEAYAYFEERRKAWREEYDRWQRMFSDWART YPEKKAEWDRFFGPVDLSKVSFPSFERGSKVATRKASGEVLKALAAGVPNLVGGSADLAPSNNTALPGYGDFSVGDRTGR TLHYGVREHAMGAVANGIALYGGLRTFCATFLVFSDYMRPPIRLAALMGLPVTYIFTHDSIFVGEDGPTHQPVEHLASLR AVPNLLVLRPGDAEETVLAWRLAMESASTPVVLALSRQGLPVYEKPAAWEEDARRGAYVVKDCEGTPDVVVVATGSEVSL ALAAAGEAEGRRVRVVSMLSRELFLSQDEAFRERIVPRDVRTVVVEAGVALGWEGFVSRRDDLVTLDRFGLSGPGGQVAE ALGLSKERVKQRIMGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-124 | 47 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-115 | 46 |
