|
Name : Spith_0011 (Spith_0011) Accession : YP_006044015.1 Strain : Spirochaeta thermophila DSM 6578 Genome accession: NC_017583 Putative virulence/resistance : Unknown Product : nucleotide sugar dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 7869 - 9194 bp Length : 1326 bp Strand : + Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; COGs: COG1004 DNA sequence : ATGCCTATGAAGATAGCGGTGGTGGGGACCGGGTATGTGGGCCTCACCACGTGTGTGGGGCTCGCCGATTTCGGCAACCA CGTAGTGGGGGTGGACATCGATCGCGAGAAGGTCGCCCGGCTTTCCGCAGGGGATCCGGTGATCTATGAGGCGGGACTCG AGTACTACCTGAGGGAGAATCTCGCCGCGGGGCGGCTCTCGTTCACCACCAGCATGAAGGAGGCCCTCCGGGATGCGGAA GTGGTCTTCCTTGCCGTGGGAACTCCTGAAAAGGAGAACGGGGAAGCGGATCTCTCCCAGATAGAGGCGGTCCTCGAGGA ACTGGCCCCCCTGATAGATCATTATCTGGTGGTGGTGACGAAGTCCACGGTGCCCGTGGGAACGAACCGATGGATCCATG AAGAGCTCTCACGGATGGTCGATCCCCGGCTCTTCGATGTGGTCTCGAATCCCGAGTTCCTCAGGGAGGGAAAGGCCATT CAGGACTTCTTCCATCCGAACAGGGTGGTGATAGGGTACGAGAACGAGCGGGTGAAGGAGGTCATGCACGAGATCTACCG CCCGCTCTACCTCATAGAGACGCCCTTCGTGTGGTGTTCCTGGGAGACTGCGGAGCTCATCAAGTATGCGGCGAACGCCT TCCTCGCCACCAAGATCTCGTTTATCAACCAGGTAGCCAATCTCGCGGAGGAAGTGGGAGCCGATGTCCATGTGATCGCC AAAGCGATGGGGATGGACGGGAGGATCAGTCCGAAATTCCTCCATCCGGGACCGGGATTCGGAGGCAGCTGCTTCCCGAA GGACACGAAGGCCCTGGTGAAGATCGGAGAGCGGTACGGGGTGGATCTCTCGCTCGTGAGGGAGGTGATCCGAGCGAACG AGGCCCAGAGAATGAGGATGGTCGAGAAGGCGAAGCGACTCCTGGGAGGCTCCCTCGAAGGTCGTCGCATAGCCGTGCTG GGACTCGCCTTCAAGGCAGAAACCGATGATGTACGTGAGACACCGGCGTATCCTATCATCCGGGCCATGCTCGAGGAAGG GGCGGTGGTGTGTGCGCACGATCCCCTCGCCATGGAGAACTTCAGGCGCCTCGTGCCTTCCATCGAGTACGCGGAGAACG AGTATGAGGCCGCACGTGGGGCCGATCTAGTCCTCATCTGTACCGAGTGGAATGAGTACCGCAATCTCGACCTCGAGCGG GTCGCGGAGCTCATGAGAGAGAGGAAGATCCTCGACACGAGGAACGTGCTCGATCCTGAACGGGCCAGGAAGACGGGTTT CGTCTATGAAGGTGTGGGACGAATACTTTTCAGGGGGAAACAATGA Protein sequence : MPMKIAVVGTGYVGLTTCVGLADFGNHVVGVDIDREKVARLSAGDPVIYEAGLEYYLRENLAAGRLSFTTSMKEALRDAE VVFLAVGTPEKENGEADLSQIEAVLEELAPLIDHYLVVVTKSTVPVGTNRWIHEELSRMVDPRLFDVVSNPEFLREGKAI QDFFHPNRVVIGYENERVKEVMHEIYRPLYLIETPFVWCSWETAELIKYAANAFLATKISFINQVANLAEEVGADVHVIA KAMGMDGRISPKFLHPGPGFGGSCFPKDTKALVKIGERYGVDLSLVREVIRANEAQRMRMVEKAKRLLGGSLEGRRIAVL GLAFKAETDDVRETPAYPIIRAMLEEGAVVCAHDPLAMENFRRLVPSIEYAENEYEAARGADLVLICTEWNEYRNLDLER VAELMRERKILDTRNVLDPERARKTGFVYEGVGRILFRGKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| udgA | YP_003784334.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 6e-56 | 41 |
| udgA | YP_005686369.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 6e-56 | 41 |
| udgA | YP_005682185.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 6e-56 | 41 |
