Gene Information

Name : Spith_1034 (Spith_1034)
Accession : YP_006045023.1
Strain : Spirochaeta thermophila DSM 6578
Genome accession: NC_017583
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1164648 - 1165328 bp
Length : 681 bp
Strand : +
Note : PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: sta:STHERM_c10090 transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Transporter; manual

DNA sequence : 
ATGGCACGCTTTGTGGTTAGGGCCGAAGGAGTGATGAAGGAGTACAGGATGGGCGAGGTGGTAGTCCCCGCACTGAGGGG
GGTGAGTATCGGGGTCGAGAAGGGAGAGTACGTGGCGATCATGGGGCCTTCCGGATCGGGGAAGTCCACGCTCATGCACC
TCGTCGGCTGTTTGGATGTCCCCACACGAGGGAAGGTGTTCATAGAGGAGGAAGATGTCTCAAGGCTCTCTGAGCGGGAG
CTTGCGAGGATCCGGAACAGGAAGATCGGTTTCGTCTTCCAGCAGTTCAACCTCCTTCCCCGGCTCACCATAGAGGAAAA
CGTGGAGACTCCTCTCATCTACGCAGGAGTCCCCTCCAAGGAGCGGCGGAGACGGGCGATAGGGTCCCTCGAGAGAGTCG
GCCTCTCGCATCGCCTCTCCCACCGACCCACGGAACTCTCGGGAGGAGAACGTCAGCGGGTGGCGATCGCCAGGGCCTTG
GTGACCGAGCCTCTCATCATACTCGCCGATGAACCCACCGGAGCCCTGGATACGGAGACCGGAAGGAAAATCCTCGATCT
TTTCCGGGAGCTCCATGAGGAAGGGCGTACGTTGGTGATAGTGACACATGATCCCGAGGTGGCGCAAGAGGCCCAGCGCG
TGATACGTATACGAGACGGGCTCATAGAGGAGGAGGTATGA

Protein sequence : 
MARFVVRAEGVMKEYRMGEVVVPALRGVSIGVEKGEYVAIMGPSGSGKSTLMHLVGCLDVPTRGKVFIEEEDVSRLSERE
LARIRNRKIGFVFQQFNLLPRLTIEENVETPLIYAGVPSKERRRRAIGSLERVGLSHRLSHRPTELSGGERQRVAIARAL
VTEPLIILADEPTGALDTETGRKILDLFRELHEEGRTLVIVTHDPEVAQEAQRVIRIRDGLIEEEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spith_1034 YP_006045023.1 ABC transporter NC_012469.1.7686878. Protein 1e-57 54
Spith_1034 YP_006045023.1 ABC transporter NC_008702.1.4606598. Protein 9e-44 50
Spith_1034 YP_006045023.1 ABC transporter CP001581.1.gene798.p Protein 4e-42 45
Spith_1034 YP_006045023.1 ABC transporter CP001581.1.gene598.p Protein 1e-39 44
Spith_1034 YP_006045023.1 ABC transporter NC_012469.1.7686946. Protein 7e-28 43