Gene Information

Name : clpE (SeseC_00729)
Accession : YP_006042508.1
Strain : Streptococcus equi ATCC 35246
Genome accession: NC_017582
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding subunit ClpE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 607509 - 609659 bp
Length : 2151 bp
Strand : -
Note : -

DNA sequence :
ATGAAAACAGACCCTAAAAATCCTATCCTGGGAGGCTATACTGGCAATCAAAAGGCCCAGCAGCAGTCTCAAAACCCTTT
CTTTGATGACTTTTTTGGTGACCTCAACAACTTTAGAGCCTTTGGTCAGCTCCCCAATACACCACCTACCCAATCAGGAG
GCCAGCATGGCGGAGGTCACAACGGTGGCTACCGTCCCAATCACACACAGCCAGCACAAGAGACTAACAAAGGTTTGCTT
GAAGAATTCGGCATTAATATCACTGAAATGGCTAAGCGTGGTGATATTGACCCGGTCATCGGACGTGACGATGAGATTAT
CCGCGTGATCGAAATTCTCAATCGCCGAACGAAAAATAACCCTGTCCTAATCGGTGAGCCTGGAGTTGGTAAGACTGCTG
TCGTTGAAGGCCTTGCTCAAAAAATCGTTGATGGTGATGTGCCACAAAAGCTACAGAGTAAGCAGGTGATTCGCCTTGAT
GTGGTTAGCCTCGTTCAGGGGACAGGTATTCGTGGCCAATTTGAAGAGCGCATGCAAAAGCTCATGGAGGAAATCCGCAA
GCGCCATGACGTTATCCTTTTTATTGATGAAATCCATGAAATTGTGGGAGCCGGGGCAGTTGGTGATGGCAGTATGGACG
CAGGAAATATTTTAAAGCCAGCACTTGCTCGTGGTGAGCTTCAATTAGTGGGAGCCACCACTCTCAATGAATACCGCATT
ATCGAAAAGGACGCAGCCCTCGAACGACGCATGCAGCCGGTTAAGGTAGATGAGCCCTCGGTTGAAGAAACAATCACGAT
CCTAAAAGGAATCCAAGCCAAATACGAGGACTATCACCATGTCAAATATAGCCAGTCAGCTATCGAAGCAGCCGCCAACC
TCTCCAACCGCTATATTCAAGACCGCTTCTTGCCTGATAAGGCCATTGACCTACTAGATGAGGCTGGCTCAAAAATGAAC
CTAACCCTTAACTTTGTTGACCCAAAAGACATCGACAAGCGTTTGATTGAGGCAGAAAACCTTAAGGCACAAGCCACACG
TGATGAGGATTATGAGCGAGCAGCCTACTTCCGCGATCAAATCGCCAAATACAAAGAAATGCAGGCTCAAAAGCTAGATG
AGCAGGATACTCCAATCATTACCGATAAGACCATCGAAGCAATCGTTGAGCAAAAAACCAATATTCCAGTTGGTGATTTA
AAGGAAAAGGAACAATCACAGCTAGTCAATCTGGCTGCCGATCTCAAAAAGCATGTTATCGGTCAAGACGATGCTGTTGA
TAAAATTGCAAAAGCTATCCGTCGTAATCGTGTTGGACTGGGAGCGCCAAATCGTCCTATCGGCTCCTTCCTCTTTGTTG
GGCCAACTGGTGTCGGTAAAACAGAGCTTTCCAAGCAATTAGCTATTGAGCTTTTTGGCTCTGCTGATAATATGATTCGC
TTTGACATGTCTGAATATATGGAAAAGCATGCTGTGGCTAAGCTTGTAGGTGCCCCTCCAGGCTACGTTGGCTATGAGGA
GGCAGGGCAGTTAACAGAGCAGGTACGCCGCACCCCTTACTCGCTCATTTTGTTAGATGAGATTGAAAAGGCTCACCCTG
ATGTCATGCACATGTTTTTACAGGTCCTAGATGACGGTCGATTAACCGACGGACAGGGACGTACCGTTAGCTTTAAGGAC
ACTATTATCATCATGACATCAAATGCTGGCACTGGCAAAACAGAAGCCTCAGTCGGCTTTGGTGCTGCTAGAGAAGGACG
GACAAACTCTGTCCTAGGTGAGCTTAGTCATTTCTTTAGTCCCGAATTTATGAACCGCTTTGACGGGATTATTGAGTTTC
AGCCACTAAGCAAGGACAATCTTTTACGTATCGTTCACTTAATGCTTGATGACGTTAATCAGCGCCTTGCTCACAATAGC
ATTCACCTTGATGTGACCGAAAAGGTCAAGGAAAAGCTCGTCGAGCTAGGCTATGATCCCAAGATGGGAGCACGACCATT
GCGCCGCACCATTCAGGATTACATTGAGGATGCCATTACAGACTTTTACCTTGAGCACCCAACTGAAAAGAACCTGCGAG
CTGTTTTGACCTCTAATGGACACATTACAATCAAGCCTGTAGTCAAATCTCAGGCGAAGCAGGCGGACTAA

Protein sequence :
MKTDPKNPILGGYTGNQKAQQQSQNPFFDDFFGDLNNFRAFGQLPNTPPTQSGGQHGGGHNGGYRPNHTQPAQETNKGLL
EEFGINITEMAKRGDIDPVIGRDDEIIRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIVDGDVPQKLQSKQVIRLD
VVSLVQGTGIRGQFEERMQKLMEEIRKRHDVILFIDEIHEIVGAGAVGDGSMDAGNILKPALARGELQLVGATTLNEYRI
IEKDAALERRMQPVKVDEPSVEETITILKGIQAKYEDYHHVKYSQSAIEAAANLSNRYIQDRFLPDKAIDLLDEAGSKMN
LTLNFVDPKDIDKRLIEAENLKAQATRDEDYERAAYFRDQIAKYKEMQAQKLDEQDTPIITDKTIEAIVEQKTNIPVGDL
KEKEQSQLVNLAADLKKHVIGQDDAVDKIAKAIRRNRVGLGAPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADNMIR
FDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEQVRRTPYSLILLDEIEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKD
TIIIMTSNAGTGKTEASVGFGAAREGRTNSVLGELSHFFSPEFMNRFDGIIEFQPLSKDNLLRIVHLMLDDVNQRLAHNS
IHLDVTEKVKEKLVELGYDPKMGARPLRRTIQDYIEDAITDFYLEHPTEKNLRAVLTSNGHITIKPVVKSQAKQAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 4e-151 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpE YP_006042508.1 ATP-dependent Clp protease ATP-binding subunit ClpE VFG0080 Protein 0.0 63
clpE YP_006042508.1 ATP-dependent Clp protease ATP-binding subunit ClpE VFG0079 Protein 1e-159 54