Gene Information

Name : STH8232_0666 (STH8232_0666)
Accession : YP_006040344.1
Strain : Streptococcus thermophilus JIM 8232
Genome accession: NC_017581
Putative virulence/resistance : Virulence
Product : tn5252 ORF21, frameshift and internal deletion (TraG/TraD family)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 531734 - 533551 bp
Length : 1818 bp
Strand : +
Note : -

DNA sequence :
ATGTATTCCAGGCAAAAAGCATTTGTCTTTGGTCTCTTGGGTCTCGCCTTTGGCTATTTCTGCCATCGTCTAACTCTACT
CTATGATAGTTTAACCAATGCCCCACCTATGGAACGATTTGCCTACCTCTTAGGAGAGGGGTTAAATCAGGTTTTCAATC
CTTTATGGCTATTTTCCTTTACTCAAAAATCTCTTCTTGCCTTTATCCTTTGGGTTCTAACGATGACACTAGTCTATCTT
TATGTATCGTCAGGACAGAAGGTCTATCGAGAAGGGGAAGAATACGGTTCTGCACGATTTGGAACCAGTAAGGAAAAGCG
GAACTTTTACAGTAAGAATCCTTTTAATGACACGATTTTGGCTCGTGATGTTCGTCTAACCTTGTTGGAAAAGAAGAAAC
CCCAGTTTGACCGAAATAAAAACTTGATTGTCATTGGGGGTTCTGGTGCAGGTAAGACCTTTCGCTTTGTGAAGCCCAAT
CTTATCCAACTTAACTGTTCCAATATTGTCGTAGATCCTAAAGACCATTTGGCTGAGAAGACAGGTAAACTCTTTTTAGA
AAACGGTTATCAGGTCAAGGTTTTAGATTTGGTTAATATGACCAATTCAGATGGTTTTAATCCCTTTCGTTATGTTGAGA
CAGAAAATGATTTGAACCGCATGTTAACGGTCTATTTTAACAATACCCGTGGGTCTGGTTCTCGTAGTGATCCATTTTGG
GACGAGGCTTCCATGACATTGGTGAGAGCTATTGCCTCATATTTGGTGGATTTTTACAATCCTCCAGGAAGTTCCAAGCA
AGAGCAGGAAGTAAGACGTAAGCGTGGCCGTTATCCAGCCTTTTCTGAGATTGGGAAACTCATCAAACTCTTATCAAAGG
GAGACAATCAGGACAAAAGTGTTCTTGAAGTCCTGTTTGAAGACTATGCTAAGAAATATGGTCATGAGAACTTTACCATG
AGAAACTGGGCGGATTTTCAGAACTACAAGGACAAGACCTTGGATTCGGTCATTGCTGTGACGACCGCTAAATTTGCCTT
CTTTAATATCCAATCGGTGATTGATTTGACGCAAAGAGACACTATGGACTTGAAAACGTGGGGCACTCAAAAGACCATGG
TTTATCTTGTTATTCCAGACAATGATACGACCTTTCGTTTCCTATCTGCTTTATTTTTCTCTACGGTTTTCTCCACTTTG
ACCAGACAGGCTGATGTTGACTTTAAAGGGCAACTGCCTATTCATGTTAGAAGCTATCTGGATGAGTTTGCGAATGTCGG
AGAAATCCCAGACTTTGCCGAACAAACCTCAACAGTTCGCTCTAGAAACATGAGCTTAGTTCCTATCTTGCAAAATATTG
CTCAACTCCAAGGACTTTATAAGGAAAAAGAGGGTTGGAAAACTATACTGGGGAACTGTGACAGCCTCCTCTATTTGGGT
GGAAATGACGAGGAAACTTTTAAATTTATGAGTGGTCTATTAGGCAAACAAACCATTGATGTCAGAAGTACCAGTCGTTC
TTTTGGGCAGACGGGTTCAAGTTCTACCTCTCACCAGAAAATTGCCCGTGACTTGATGACGGCTGATGAAGTCGGAAATA
TGAAACGAGATGAGTGCCTTGTACGCATTGCAGGGGTTCCTGTTTTTCGAACCAAGAAATATTTTCCACTCAAACATAAG
AATTGGAAATGGCTTGCAGATAAGGAATCTGATGAACGCTGGTGGCACTATCATATCAATCCCCTAACCGCTGAGGAAGA
GTTAGATTTGTCAGGCCATAAAATAAGGGATTTAAGCACAGAAACGACACTACATTAA

Protein sequence :
MYSRQKAFVFGLLGLAFGYFCHRLTLLYDSLTNAPPMERFAYLLGEGLNQVFNPLWLFSFTQKSLLAFILWVLTMTLVYL
YVSSGQKVYREGEEYGSARFGTSKEKRNFYSKNPFNDTILARDVRLTLLEKKKPQFDRNKNLIVIGGSGAGKTFRFVKPN
LIQLNCSNIVVDPKDHLAEKTGKLFLENGYQVKVLDLVNMTNSDGFNPFRYVETENDLNRMLTVYFNNTRGSGSRSDPFW
DEASMTLVRAIASYLVDFYNPPGSSKQEQEVRRKRGRYPAFSEIGKLIKLLSKGDNQDKSVLEVLFEDYAKKYGHENFTM
RNWADFQNYKDKTLDSVIAVTTAKFAFFNIQSVIDLTQRDTMDLKTWGTQKTMVYLVIPDNDTTFRFLSALFFSTVFSTL
TRQADVDFKGQLPIHVRSYLDEFANVGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLYKEKEGWKTILGNCDSLLYLG
GNDEETFKFMSGLLGKQTIDVRSTSRSFGQTGSSSTSHQKIARDLMTADEVGNMKRDECLVRIAGVPVFRTKKYFPLKHK
NWKWLADKESDERWWHYHINPLTAEEELDLSGHKIRDLSTETTLH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0973 YP_001198339.1 Type IV secretory pathway, VirD4 component Virulence 89K Protein 0.0 99
SSU98_0987 YP_001200545.1 Type IV secretory pathway, VirD4 component Virulence 89K Protein 0.0 99
traG YP_006309931.1 TraG/TraD family protein Not tested FWisland_1 Protein 0.0 76