Gene Information

Name : cas1-3 (STH8232_2139)
Accession : YP_006041734.1
Strain : Streptococcus thermophilus JIM 8232
Genome accession: NC_017581
Putative virulence/resistance : Virulence
Product : CRISPR-associated protein cas1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1770836 - 1771033 bp
Length : 198 bp
Strand : -
Note : -

DNA sequence :
ATGGAAACAAAGATTCAGGAACTTCGCAAGGCTAATAAGATTAGTCAGGCAGAATTAGCAGATGAGATGGGAGTCACGAG
GCAGACCATCATTTTACTCGAAAAAGGGCGCTATAATGCGTCGTTGGAACTAGCTTTTAAAATTGCTAGGTATTTTGGAA
AGACTATTGAAGAAGTCTTTATTTTTGAAGAAGATTAA

Protein sequence :
METKIQELRKANKISQAELADEMGVTRQTIILLEKGRYNASLELAFKIARYFGKTIEEVFIFEED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 3e-08 47
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 4e-08 47
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 4e-10 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cas1-3 YP_006041734.1 CRISPR-associated protein cas1 VFG2168 Protein 1e-08 47
cas1-3 YP_006041734.1 CRISPR-associated protein cas1 VFG2175 Protein 1e-08 47