Gene Information

Name : lBA1838 (STH8232_1598)
Accession : YP_006041227.1
Strain : Streptococcus thermophilus JIM 8232
Genome accession: NC_017581
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1331168 - 1331842 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence : 
ATGTCAAATCTAATTTTCGACTCAGTCACAAAAATTTTTGGTAAAGGGAGTAGTAAGTACGTAGCACTAGAAAATATTAA
TTTCGAAGCAGAAAGCGGTCAGCTTATTTTAGTTGTAGGGCCATCAGGATCAGGGAAAACTACATTTTTGACTATAGCAG
GCGGACTACAGACACCAACTAATGGTGACGTAAAAATAAATGACAGTACAATTAACAGTTTGTCCAAAAAACAACAAACA
AAATTAAGATTGGAAAAAATAGGATTTATTTTACAATCTTATAACTTAGTCCCATTTTTAACGGTCGAAGAACAGTTTAA
ATTCGTAGATAAACTAAAAAAACAAAATTTGACTGAACAAAAATTGCATGAGCTTCTTTCTGATTTAGGACTTTTAGAAC
TGCTAAAAAAATATCCTAATCAACTTTCTGGTGGACAAAAGCAGCGTGTGGCAATTGCTAGAGCATTATACACTGATCCT
GACTATATTTTAGCAGATGAACCCACAGCCGCATTAGATACAGATAGATCCATGAAAGTAATCGAGTTACTCAGAGATTT
AGCGCACAAAAGAAATAAAATTATTATTGTAGTTACTCATGACTTAAGGTTAAAAGATATGGCAGACAAAGTTTATCAGA
TAATTGACGGTAAAATGACAATCCTGGAGAAGTAA

Protein sequence : 
MSNLIFDSVTKIFGKGSSKYVALENINFEAESGQLILVVGPSGSGKTTFLTIAGGLQTPTNGDVKINDSTINSLSKKQQT
KLRLEKIGFILQSYNLVPFLTVEEQFKFVDKLKKQNLTEQKLHELLSDLGLLELLKKYPNQLSGGQKQRVAIARALYTDP
DYILADEPTAALDTDRSMKVIELLRDLAHKRNKIIIVVTHDLRLKDMADKVYQIIDGKMTILEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 4e-45 51
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 3e-40 51
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lBA1838 YP_006041227.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-30 43
lBA1838 YP_006041227.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 8e-29 41