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Name : clpC (STH8232_0117) Accession : YP_006039848.1 Strain : Streptococcus thermophilus JIM 8232 Genome accession: NC_017581 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 90845 - 93274 bp Length : 2430 bp Strand : + Note : - DNA sequence : ATGCAGGCCATTTTCCATCGTGCTCAGCTTGAAGCGGAGCGTTTTGAAAGTCCTTTCTTGGAGACTTGGCATGTGCTTCT GGCTATGGTTGAGGTTCCGGGATCTGTAGCCTACTTAACATTTACTGATTTTGAGGACCGTATTCATTCGGAAGAGATTG AGACAGCTGCTGTATTGGCTATGGAGAAGAGGCCAAAAGACTTGTCGAAATCAGATATTATCGATTTACGTGCACAGTCA CCTGCGCTAGAGGCTATGTTGCAAGAGGCGCAAGGAATCGCTAGTGTGACTGGTGCTGTAGAGGTGGGGTCTGAACATGT ATTGATGGCCTTCCTTCTTCATAAGGATTTAATGGTTTGTCGCCTCCTTGAAGTGGCTGGTTTTCAATATAAAGATGATA GCGATAAACCTCGCATCATAGATTTACGACGTTCTTTGGAGCGTAATGCTGGTCTTAGCAAGCAAGATTTGAAGGCAATT CACGATCTTCGTAAACCTAAGAAATCAAAAGCATCTGCGAATTTTGCCAATATGATGCAACCTCCTCAATCATCTACTGG TGAACTGGCAGATTATACCAAAGACTTAACTGCATTAGCGGAGTCAGGAAATCTTGATCCCGTTATTGGACGCGATGAAG AAATTTCACGCATGATTCAGGTTTTGAGTCGTAAAACGAAGAATAATCCTGTCTTGGTAGGTGAAGCTGGTGTCGGTAAG ACAGCACTTGCTCTTGGTTTAGCGCAACGTATTGCTTCAGGCGAAGTACCATTTGAATTGGCTGATATGCGTATCTTAGA GCTTGACATGATGAGCGTTGTTGCAGGGACACGTTTCCGTGGTGATTTCGAAGAGCGTATGAATCAGATTATTGATGAGA TTGAAGCTGATGGGAAAATCATTCTCTTTATTGACGAACTACATACGATTATTGGATCTGGTTCAGGTATTGATAGTACC TTGGATGCGGCTAATATTTTGAAACCGGCCCTTGCGCGCGGGACACTTCACATGGTTGGAGCAACCACGCAAGCTGAATA CCAAAAGCATATTGAGAAAGATGCAGCTTTATCCCGTCGTTTTGCTAAAATTACAATTGAAGAACCAAGTGTATCTGAAG CAATCGATATTTTAAACGGTTTGCGTTCGTCTTATGAAGACTATCATCGTGTGACTATTACGGACGCGGCAGTTGAGACG GCAGTCAAGGCAGCGCATCGCTATTTGACGAGTAAGAATTTGCCTGATTCGGCAATTGACCTTTTAGATGAAGCGAGTGC AACTGTTCAAGTTCGTATCAAAAAAGAGGCCAAACGTGAGATAACGCCTTTGGATGAAGCACTTATATCTGGGGATATTA GGGCTGCTGTTAAACAGTATAAGGCTAACCAAAAGGCAAAATTTCCTAAACCTACTTTAGTAGATGCGGATCAGATTATG CAAACTCTTAGTCGTTTATCAGGTATCCCTGTTGAGAAGATGACGCAGACTGACAGCAAGCGTTACCTGAATCTTGAATC AGAACTCCACAAACGTGTTATTGGTCAAGATGAGGCGGTTTCGGCTATCAGCCGTGCTATTCGTCGTAATCAGTCAGGTA TTCGTACTGGAAAACGTCCTATTGGCTCCTTCATGTTCCTTGGACCTACTGGTGTTGGTAAGACAGAATTGGCCAAGGCT TTGGCGGAAGTTCTCTTTGATGATGAATCAGCTTTGCTTCGCTTTGATATGTCGGAGTATATGGAAAAATTTGCGGCTAG TCGCCTTAATGGTGCTCCTCCAGGGTATGTCGGATATGATGAGGGTGGAGAGTTGACAGAGAAAGTTCGAAATAAGCCCT ACTCAGTTCTTCTCTTTGACGAGATTGAGAAAGCTCATCCAGATATCTTCAACGTTCTCTTACAGGTTTTGGATGACGGT GTTTTAACAGATAGCCGTGGTCGTAAGGTTGATTTTTCAAACACTATCATCATTATGACCTCAAATTTGGGAGCTACAGC TCTTCGTGATGATAAAACTGTTGGTTTTGGTGCTCAAACTATTTCTCATAATCACCAAGCCATGCAAGCACGCATTATGG AAGAGCTTAAGAAGTCCTATCGTCCAGAATTTATTAACCGTATTGATGAGAAGGTTGTCTTCCACAGCTTAGAGGAAGAA CAACTACATGACATTGTCAAGATTATGGTTAAACCATTAATTTCAGCTCTAGCCGATAAAGGTATAAGCTTAAAATTCCA ACCAGCTGCTCTTAAGCATTTGGCTAAGGATGGCTATGATATTGAGATGGGAGCTCGTCCATTACGTCGTACGATTCAAA CTCAAGTGGAGGACAAGTTGTCTGAGTTATTACTAGGTGGCCAAGTTGTTAGCGGACAGACCCTTAAGATTGGTTGCTCG AAAGATAAATTAACCTTTACAGTAGTGTAA Protein sequence : MQAIFHRAQLEAERFESPFLETWHVLLAMVEVPGSVAYLTFTDFEDRIHSEEIETAAVLAMEKRPKDLSKSDIIDLRAQS PALEAMLQEAQGIASVTGAVEVGSEHVLMAFLLHKDLMVCRLLEVAGFQYKDDSDKPRIIDLRRSLERNAGLSKQDLKAI HDLRKPKKSKASANFANMMQPPQSSTGELADYTKDLTALAESGNLDPVIGRDEEISRMIQVLSRKTKNNPVLVGEAGVGK TALALGLAQRIASGEVPFELADMRILELDMMSVVAGTRFRGDFEERMNQIIDEIEADGKIILFIDELHTIIGSGSGIDST LDAANILKPALARGTLHMVGATTQAEYQKHIEKDAALSRRFAKITIEEPSVSEAIDILNGLRSSYEDYHRVTITDAAVET AVKAAHRYLTSKNLPDSAIDLLDEASATVQVRIKKEAKREITPLDEALISGDIRAAVKQYKANQKAKFPKPTLVDADQIM QTLSRLSGIPVEKMTQTDSKRYLNLESELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGSFMFLGPTGVGKTELAKA LAEVLFDDESALLRFDMSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNKPYSVLLFDEIEKAHPDIFNVLLQVLDDG VLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAQTISHNHQAMQARIMEELKKSYRPEFINRIDEKVVFHSLEEE QLHDIVKIMVKPLISALADKGISLKFQPAALKHLAKDGYDIEMGARPLRRTIQTQVEDKLSELLLGGQVVSGQTLKIGCS KDKLTFTVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-153 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_006039848.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG0079 | Protein | 2e-169 | 53 |
| clpC | YP_006039848.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG0080 | Protein | 3e-138 | 46 |
