Gene Information

Name : Sbal117_0939 (Sbal117_0939)
Accession : YP_006036212.1
Strain : Shewanella baltica OS117
Genome accession: NC_017579
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1055317 - 1056219 bp
Length : 903 bp
Strand : +
Note : TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerD; KEGG: shw:Sputw3181_3283 tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage

DNA sequence :
GTGCCTAAAACATACCAGCCCGATCCGCTTATTGATGTTTTTCTTGATGATCTTTGGTCGAGCAAGGGACTGAGTGACAA
CACCTTATCGGCCTATCGCACCGATTTGCGCCATTTTGATCGTTATCAAGGTCAGCAAGGGGTAACGCTGCTCGCGGTTT
CTCAGGCCGATGTCAGAGCGTATTTAGCCTTTAGAGTTGAGCAGGATTTTGCGCGCACCAGTAGCGCTCGGCTGCTCAGT
AGTTTACGGCGTTTCTATACCTATTTAGTGCAGACCAAGCAGATTTTAGCCGATCCTATGGCCCTAGTTGAGTCGCCTAA
ATTAACCCGCCATTTACCCGATTCATTGAGTGAATCACAGGTCGATCGCTTGTTGTCTGAGCCCAATGTGGAAGATGCCG
TCGAATGTCGCGACAAAGCCATGCTAGAGCTGTTGTATGCCACAGGCTTGAGGGTGAGCGAGCTCGTTGGCTTGACGATG
GAGCAGATGAGCCTGCGCCAAGGCTTAGTGCGCATTGTGGGTAAGGGCGGCAAAGAGCGTCTCGTGCCGCTGGGTGAATT
AGCGATTACCGAAGTCGAGAGCTACATGAAGTTTGCTCGCCAAGAGTTGCTTGGCAATAAACAATCCGATGTGGTGTTTC
CGTCAAAACGCGGGCAGATGATGACGCGGCAAACCTTTTGGCATCGGATTAAGCTGTATGCCCTGCGTGCTGGGATTGAA
ACCGCATTATCACCGCACACATTGCGCCATGCTTTTGCTACCCATTTGCTCAATCACGGTGCCGATCTGCGGGTGGTGCA
ATTGCTGTTAGGCCATAGCGACCTGTCGACCACGCAGATTTATACCCATGTGGCGCGGGCAAGGTTGCAGGAATTGCATC
AACAGCATCATCCAAGAGGCTGA

Protein sequence :
MPKTYQPDPLIDVFLDDLWSSKGLSDNTLSAYRTDLRHFDRYQGQQGVTLLAVSQADVRAYLAFRVEQDFARTSSARLLS
SLRRFYTYLVQTKQILADPMALVESPKLTRHLPDSLSESQVDRLLSEPNVEDAVECRDKAMLELLYATGLRVSELVGLTM
EQMSLRQGLVRIVGKGGKERLVPLGELAITEVESYMKFARQELLGNKQSDVVFPSKRGQMMTRQTFWHRIKLYALRAGIE
TALSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVARARLQELHQQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 9e-56 57
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 9e-56 57