Gene Information

Name : Sbal117_0071 (Sbal117_0071)
Accession : YP_006035370.1
Strain : Shewanella baltica OS117
Genome accession: NC_017579
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.22
Position : 84273 - 85436 bp
Length : 1164 bp
Strand : -
Note : TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: shw:Sputw3181_0063 UDP-glucose/GDP-mannose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; UDP-glucose/GDP-mannose dehydrogenase, dim

DNA sequence : 
ATGAAAATTGTTGTTGTTGGGATGGGCTATGTGGGCCTATCAAATGCCGTCTTATTGGCGCAGCAAAACCAAGTCACTGC
AATTGATTTAGTTCCTGAACGTGTCAAGCAAGTTAACGAGCGTAAATCCACTGTGGTCGATGAATTAATCGAAGATTACC
TGCAAAACAAACCGTTGAATTTAACTGCGACAACGGAAAATGTAGCCTTTCAATCGGCTGACTTTGTGATTATTGCGACT
CCAACAGACTACGATCCTCAGACTAATTATTTTAATACCCATTCGGTTGAAAGCGTCATTCATGATGTACTCGCTGTTAA
TCCTGATACGACTATTATCATCAAATCGACTGTCCCCGTCGGTTATACAGCAGCATTAAGGCACAAGTTTAAGAGCGACA
ACATACTCTTTTCTCCAGAGTTTTTACGCGAAGGTAAAGCCTTGTATGACAACCTTTATCCCTCACGGATCGTCGTCGGT
GAACGCTCCGCGCGTGCCCAAGTCTTTGCAGACCTTTTAGCCAAGGCGGCAATCAAGCAAGATATTCCTATTTTGCTGAC
CGATAGCACTGAAGCCGAAGCGATTAAGTTATTTGCTAATACATTTCTCGCCATGCGGGTCGCCTACTTTAACGAGCTCG
ATACCTATGCAGAGAGTCGAGGATTAAATACTCGCCAGATTATTGAGGGGGTTAGCCTCGATCCGCGTATTGGTGATTAT
TACAACAATCCTTCTTTTGGCTATGGCGGGTACTGTCTTCCGAAAGACACTAAGCAATTACTGGCTAACTACAATGATGT
CCCAAACAATTTAATCAGTGCCATTGTCGACTCAAACACCACACGCAAAGACTTTATCGCCGACGCTATTATCAGTAAGC
AGCCAAAATGTGTAGGAATTTATCGTTTGATCATGAAAGCCGATTCAGACAATTTCCGCGCCTCAGCAGTGCAAGGCGTG
ATGAAGCGCATTAAAGCAAAAGGCATTGAAGTCGTCGTGTTTGAGCCTGTACTTAAAGAAGATTACTTTTTCAAATCTCG
CGTGATGAGAGACTTAACTGAATTTAAGTCAATGTGTGATGTGATCGTCTCCAACCGTATGGTTGATGAACTCAATGATG
TTGCGGATAAAGTCTATACCCGAGATCTATTTAACCATGATTAA

Protein sequence : 
MKIVVVGMGYVGLSNAVLLAQQNQVTAIDLVPERVKQVNERKSTVVDELIEDYLQNKPLNLTATTENVAFQSADFVIIAT
PTDYDPQTNYFNTHSVESVIHDVLAVNPDTTIIIKSTVPVGYTAALRHKFKSDNILFSPEFLREGKALYDNLYPSRIVVG
ERSARAQVFADLLAKAAIKQDIPILLTDSTEAEAIKLFANTFLAMRVAYFNELDTYAESRGLNTRQIIEGVSLDPRIGDY
YNNPSFGYGGYCLPKDTKQLLANYNDVPNNLISAIVDSNTTRKDFIADAIISKQPKCVGIYRLIMKADSDNFRASAVQGV
MKRIKAKGIEVVVFEPVLKEDYFFKSRVMRDLTEFKSMCDVIVSNRMVDELNDVADKVYTRDLFNHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 3e-93 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal117_0071 YP_006035370.1 nucleotide sugar dehydrogenase VFG0963 Protein 1e-100 55