Gene Information

Name : Sbal117_0449 (Sbal117_0449)
Accession : YP_006035740.1
Strain : Shewanella baltica OS117
Genome accession: NC_017579
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 491704 - 493779 bp
Length : 2076 bp
Strand : -
Note : TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; KEGG: shw:Sputw3181_0304 ATP-dependent DNA helicase RecG; SMART: DEAD-like

DNA sequence :
TTGCAGCAATTGGATCTTGTTCCGATCACCGACCTCAAAGGCGTCGCCAAAAAGGTCGCGGAGAAACTCGCAAAGCTCGG
CATCACAACAGTACAAGATCTGCTGTTTCACTTACCCCTGCGCTACGAAGACAGAACCCAAATCTATCCGATTGCCGCCC
TTATGCCCGGCAGTTACGGCACCATAGAAGCTGAAATCCAATCGACGCAAATCATCCAAGGCCGCAAGCGTATGCTGGTC
TGCAATGTGCGCGACGATACGGGTAGCTTGAGCCTGCGCTTCTTTAACTTTTCCGTCGCCCAGCGTAATGCCATGCAAAA
TGGTTTAATGATCCGCGCCTACGGTGAAGTGCGCCGTGGCGGCCATCAAGCCGAGATAGTGCACCCTGAATATAAAGTCG
TGTATCCCGGTGAAGATGTTCATCTGAGTGATACCCTAACGCCGATTTATCCCACAACTGAAGGATTAAAACAGGCAAGT
TGGCTCAAGCTGACCGAGCAAGCCTTGGTATTACTGGAAGATGGCGGCTTAACTGAGCTGCTGCCACCGCAGTTGCAACC
GAATAACATTAGCCTTAAACAAGCGCTGCAGACGCTGCATCGACCTCCTGCGGGGATCTCTCAGTTCGATTTAGAGTTAG
GCCAACACCCAGCACAGCAGCGACTCGTGCAGGAAGAATTACTCGCCCATAATCTCAGCATGTTACGCCTAAGACAGCGC
AGTAATTTAGACGCTGCCGTCACCATGCAGGCCACGGGGCAGTTGCTCAATCCCTTCCTCGCCGCTTTGCCTTTTAAGCC
CACGGGCGCCCAGCAAAGAGTGGTGGCCGATATAGGCAAAGATTTAGAAAAACCGCACCCTATGATGCGCTTAGTACAAG
GAGATGTTGGTTCAGGTAAAACCTTAGTCGCGGCGATGGCGGCTCTTCAAGCGATTGAAAACGGCTATCAAGTTGCCATG
ATGGCGCCAACAGAGCTATTGGCCGAGCAACATGCGACTAACTTTGCCGCTTGGTTTGAGCCACTCGGACTTAAAGTCGG
TTGGCTGGCGGGTAAACTCAAAGGCAAGGTCAGAGCGCAATCCCTTGCGGATATTGAATCCGGCGCCGCCCAGATGGTGA
TTGGTACCCATGCCATCTTCCAGCAGCATGTGGTCTTTAGCAAACTTGCGTTAATTATCATAGATGAGCAGCACAGATTC
GGCGTACACCAACGCTTAGGCCTACGGGAAAAGGGCGTGAGCCAAGGCTTCCACCCGCATCAATTGATCATGACGGCAAC
GCCGATCCCGCGCACGCTGGCGATGACAGCCTATGCGGATCTCGACACATCCATTATCGATGAACTGCCGCCGGGACGGA
CACCCGTGACCACAGTGGCGATTGCCGATTCACGCCGCAACGAAGTGCTTGAACGGGTACGTAACGCCGTCATCACAGAT
AAACGTCAGGCCTACTGGGTGTGCACTCTGATTGAAGAATCCGAAGTGCTCGAATGCCAAGCCGCCGAAGACACGGCCGA
AGAACTGCGCCTCGCCCTGCCCGAGCTCAATATCGGCCTCGTGCATGGCAGGTTGAAGAGTGCCGAAAAACAGCAAATTA
TGGCCGATTTTAAGGCGGGCATAATTCATTTACTGGTGGCAACAACCGTGATTGAAGTCGGCGTCGATGTGCCTAATTCC
AGCCTGATGATCATTGAAAACCCTGAACGTTTAGGTTTGGCACAACTACACCAACTGCGCGGACGAGTCGGTCGAGGCGC
CATCGCAAGCCATTGTGTGTTACTCTACAAGGCGCCATTGAGCCATACCGCCACCCAAAGACTGAGTGTACTCAGGCAAA
GTAATGACGGTTTCATCATAGCGCAGAAAGATTTAGAAATTCGTGGCCCAGGTGAAGTGCTTGGCACTAAGCAAACGGGA
CTGGCCGAGCTGAAAATTGCCGATCTGGTGCGCGATCAAGCCTTGATCCCGCATATTCAAAAACTGGCAAATCATGTGAT
GGCGCAGGCCCCCGAAAAAGTCGATGCGATAATCTTACGTTGGCTCGGGCACAAGCAGCACTATGTGCAGGCTTAG

Protein sequence :
MQQLDLVPITDLKGVAKKVAEKLAKLGITTVQDLLFHLPLRYEDRTQIYPIAALMPGSYGTIEAEIQSTQIIQGRKRMLV
CNVRDDTGSLSLRFFNFSVAQRNAMQNGLMIRAYGEVRRGGHQAEIVHPEYKVVYPGEDVHLSDTLTPIYPTTEGLKQAS
WLKLTEQALVLLEDGGLTELLPPQLQPNNISLKQALQTLHRPPAGISQFDLELGQHPAQQRLVQEELLAHNLSMLRLRQR
SNLDAAVTMQATGQLLNPFLAALPFKPTGAQQRVVADIGKDLEKPHPMMRLVQGDVGSGKTLVAAMAALQAIENGYQVAM
MAPTELLAEQHATNFAAWFEPLGLKVGWLAGKLKGKVRAQSLADIESGAAQMVIGTHAIFQQHVVFSKLALIIIDEQHRF
GVHQRLGLREKGVSQGFHPHQLIMTATPIPRTLAMTAYADLDTSIIDELPPGRTPVTTVAIADSRRNEVLERVRNAVITD
KRQAYWVCTLIEESEVLECQAAEDTAEELRLALPELNIGLVHGRLKSAEKQQIMADFKAGIIHLLVATTVIEVGVDVPNS
SLMIIENPERLGLAQLHQLRGRVGRGAIASHCVLLYKAPLSHTATQRLSVLRQSNDGFIIAQKDLEIRGPGEVLGTKQTG
LAELKIADLVRDQALIPHIQKLANHVMAQAPEKVDAIILRWLGHKQHYVQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 5e-101 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal117_0449 YP_006035740.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 59