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Name : Sbal117_4375 (Sbal117_4375) Accession : YP_006039522.1 Strain : Shewanella baltica OS117 Genome accession: NC_017579 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : - COG ID : - EC number : - Position : 5041616 - 5043733 bp Length : 2118 bp Strand : - Note : KEGG: shm:Shewmr7_0151 general secretion pathway protein D; TIGRFAM: Type II secretion system gspD; PFAM: Type II/III secretion system; NolW-like DNA sequence : ATGAATAACAAAAGGATTCGACGCAAGCTGATTGCAGGGATTGTTGCGGGTGCAGCCATGTTCTCCTCCCAATTCGCTTG GTCTGAACAGTATGCGGCCAACTTTAAGGGCACGGATATTCAAGAGTTTATCAACATAGTTGGTAAAAACTTGAACAAGA CCATCATAGTCGACCCGACGATCCGCGGTAAAATCAACGTTCGCAGTTATGATCTGCTGAACGATGAACAGTATTACCAG TTTTTCCTCAACGTCTTACAAGTCTACGGTTATGCCATCGTCGAGATGGAGAATAACGTCATCAAAGTCATCAAAGACAA AGACGCCAAAACTGCAGCAATCCGAGTGGCTAATGATGCCGAACCTGGGATAGGCGATGAGATGGTCACGCGTATCGTGG CGCTGTATAACACTGAGGCCAAACAATTAGCTCCGCTGTTACGCCAATTAAATGATAACGCGGGTGGCGGTAACGTAGTG AACTACGATCCCTCCAACGTCTTGATGCTGTCTGGCCGTGCCGCTGTGGTGAACAAGTTAGTTGAAATCGTTCGCCGCGT AGATAAACAGGGCGACACCTCAGTACAAGTGGTGCCGTTAGAGTTCGCTTCCGCCGGTGAAATGGTACGAATTATCGATA CCCTTTATCGCGCCACGGCTAACCAATCTCAAATGCCAGGCCAAGCGCCGAAAGTGGTTGCTGACGAACGTATCAACGCT GTGGTTGTTAGCGGCGACGAAAAGAGCCGCCAACGTGTGGTTGAGCTTATTCATCGTCTTGATGCCGAGCAAGCCAGCAC AGGCAACACTAAGGTGCGTTACTTACGTTATGCCAAAGCAGAAGATTTAGTTGAAGTGCTGACAGGTTTTGCTCAAAAGC TAGAGGGCGATAAAGATCCAAGCGCTCAAGCTGCAGGTGGCAAACGCCGTAATGAAATCAATATTATGGCCCATGCCGAG ACCAACGCTTTAGTGATCAGTGCCGAACCCGATCAAATGCGGACTATCGAGAGCGTGATTAATCAGCTCGATATTCGCCG TGCTCAAGTGTTAGTCGAAGCGATCATTGTCGAAGTTGCTGAAGGCGATAACGTTGGCTTCGGCGTGCAATGGGCGTCTA AAGCGGGTGGTGGGACTCAGTTTAATAACTTAGGCCCAACCATTGGTGAAGTCGGTGCGGGTGTTTGGGCGGCTCAGACT GAGAAAGCTTCTCAAACCTGTACAGGTTCAGGTGATAATAAGACCTGTACAGATAACCCAGATAAGCGCGGTGATGTGAC ACTACTTGCCCAAGCTTTAGGCAAAGTAAACGGTATGGCTTGGGGCGTGGCCATGGGCGACTTTGGTGCCTTAATTCAAG CCGTGTCGAGTGACACTAACTCAAACGTACTGGCGACACCGTCAATTACCACTTTAGATAACCAAGAAGCGTCTTTCATC GTCGGTGATGAAGTGCCTATTCTGACGGGCTCTACCGCCAGTTCGAGCAACAGTAACCCATTCCAAACCGTTGAACGTAA GGAGGTTGGGGTTAAGCTGAAAGTGGTGCCGCAGATCAACGAAGGTAATGCGGTTAAGCTGACGATTGAACAGGAAGTGT CAGGGGTTAACGGTAACACAGGGGTGGATATTTCCTTTGCTACTCGCCGTTTAACCACCACTGTTATGGCTGACTCAGGT CAAATCGTGGTTCTGGGTGGCTTGATCAACGAAGAAGTACAAGAAAGCATACAGAAAGTACCGTTCTTGGGTGATATCCC CATCATTGGCCACTTGTTTAAATCTTCTTCGAGCAAAAAGACCAAGAAAAACCTGATGATCTTCATCAAGCCAACCATTA TCCGTGATGGCATCACAATGGAAGGAATTGCTGGTCGTAAATATAACTATTTCAGAGCATTACAACTTGAGCAGCAAGAA CGTGGCGTTAACTTAATGCCAAATACTAAAGTGCCTGTGTTGGAAGAATGGAATCAATCAGAGTATTTACCGCCAGAAGT TAACGCGATTTTAGAGCGTTATAAAGAAGGCAAAGGTTTAGATACCCAGATGCGCAAAACGGATCCGACCTTAAAGTCAC TGGAAGAAAACAAGAATAAAGATAAAACCAATGAGTGA Protein sequence : MNNKRIRRKLIAGIVAGAAMFSSQFAWSEQYAANFKGTDIQEFINIVGKNLNKTIIVDPTIRGKINVRSYDLLNDEQYYQ FFLNVLQVYGYAIVEMENNVIKVIKDKDAKTAAIRVANDAEPGIGDEMVTRIVALYNTEAKQLAPLLRQLNDNAGGGNVV NYDPSNVLMLSGRAAVVNKLVEIVRRVDKQGDTSVQVVPLEFASAGEMVRIIDTLYRATANQSQMPGQAPKVVADERINA VVVSGDEKSRQRVVELIHRLDAEQASTGNTKVRYLRYAKAEDLVEVLTGFAQKLEGDKDPSAQAAGGKRRNEINIMAHAE TNALVISAEPDQMRTIESVINQLDIRRAQVLVEAIIVEVAEGDNVGFGVQWASKAGGGTQFNNLGPTIGEVGAGVWAAQT EKASQTCTGSGDNKTCTDNPDKRGDVTLLAQALGKVNGMAWGVAMGDFGALIQAVSSDTNSNVLATPSITTLDNQEASFI VGDEVPILTGSTASSSNSNPFQTVERKEVGVKLKVVPQINEGNAVKLTIEQEVSGVNGNTGVDISFATRRLTTTVMADSG QIVVLGGLINEEVQESIQKVPFLGDIPIIGHLFKSSSSKKTKKNLMIFIKPTIIRDGITMEGIAGRKYNYFRALQLEQQE RGVNLMPNTKVPVLEEWNQSEYLPPEVNAILERYKEGKGLDTQMRKTDPTLKSLEENKNKDKTNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-146 | 52 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 8e-155 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sbal117_4375 | YP_006039522.1 | general secretion pathway protein D | VFG2047 | Protein | 3e-145 | 52 |
