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Name : Sbal117_4374 (Sbal117_4374) Accession : YP_006039521.1 Strain : Shewanella baltica OS117 Genome accession: NC_017579 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 5040058 - 5041623 bp Length : 1566 bp Strand : - Note : TIGRFAM: Type II secretion system gspE; PFAM: Type II secretion system protein E; KEGG: shw:Sputw3181_3703 general secretory pathway protein E; SMART: ATPase, AAA+ type, core DNA sequence : ATGAGTGAAATACAATTATCCCAAGTCGATGACCTCAGCCAAGTCTCCAATGAGCTAGGTCTGGAAGCTGAAGGTGATGA GGTGTTTCGTTCGAGCAGTAAAGAGCGTTTACCCTTTGCCTTTGCCCATCGCCACGATGTGGTGCTTGCGCCGGGTGAAA CGGGCGAGTTGAGCTTATTTTATACCAGCAAAACACCGTTAACGGCCATGCTCGAAGCACGGCGCTATTCAGGTGTCGAT TTGCCTTTGGTTAAGCTCGAAGTCGCGAAGTTTGAGGCCAAACTCACTCAAGCGTATCAGGCGAACTCGTCTGAAGCGCA GCAGTTGATGGAAGATATCGGCAACGAGATGGATTTATTCACCCTTGCCGAAGAGCTGCCGCAGACCGAAGACTTGCTCG AAGGTGATGATGACGCGCCTATCATCAAACTGATTAATGCCTTGTTATCTGAAGCGATTAAAGAAGAAGCCTCGGATATC CACATCGAAACCTACGAGAAACAGCTCGTAGTGCGTTTCCGTATCGATGGTGTGCTCAAGGAAGTCCTCAAGCCAAACCG TAAGCTGTCGTCGCTATTAGTGTCGCGGATTAAGGTGATGGCGCGCCTCGATATCGCCGAAAAACGTGTGCCACAGGATG GCCGTATTTCGCTACGTATCGCAGGTCGTGCGGTGGATGTGCGGGTATCGACCATGCCATCTAGCCATGGCGAGCGCGTC GTGCTGCGTCTGCTGGATAAAAATACCGGTAACCTCGATTTAGAACAACTGGGGATGACCGACGGTATTCGGGTTAAGTT TGAAGATCTTATTCGTCGCCCCCACGGCATCATTCTGGTCACTGGCCCAACGGGTTCAGGTAAAAGTACCACCTTGTATG CGGGTCTGACTGAGATCAACTCAAAAGACACCAACATACTTACTGTCGAAGACCCTATCGAATACGAGCTAGACGGTATC GGTCAAACCCAAGTTAACACTAAGGCTGACATGACCTTCGCCCGAGGTCTGCGCGCGATTTTGCGTCAAGATCCCGATGT GGTGATGATAGGCGAGATCCGTGACTTGGAAACCGCACAAATTGCGGTGCAAGCATCGCTCACTGGTCACATGGTAATTT CAACCCTGCATACCAACACAGCGTCTGGCGCGATTACGCGTTTGCAAGACATGGGCGTTGAGCCATTCCTCGTATCATCG AGTTTGCTCGGTGTGTTGGCGCAACGTTTGATCCGTACCCTTTGTCCGAAATGTAAAATCGAGCACGTGCCCGATGCACG TGAGCGTGAGTTACTGGGCATAGCAGCCGATGACGACAGACGTATTTTCCGTGCCAATGGCTGTAAATCCTGTGGTAACA ATGGCTACCGTGGTCGAACGGGTATTCATGAGTTATTGCTGGTTGACGACAATGTACGCGAATTGATCCATGGCGGCCGC GGTGAGTTAGCTATCGAAAAGTATATCCGTCAGTTTGTGCCGAGCATTCGTCACGATGGCATGAGCAAAGTGCTCGCGGG CATCACCACTCTCGAAGAAGTGCTACGTGTGACTCGCGAGGAGTAA Protein sequence : MSEIQLSQVDDLSQVSNELGLEAEGDEVFRSSSKERLPFAFAHRHDVVLAPGETGELSLFYTSKTPLTAMLEARRYSGVD LPLVKLEVAKFEAKLTQAYQANSSEAQQLMEDIGNEMDLFTLAEELPQTEDLLEGDDDAPIIKLINALLSEAIKEEASDI HIETYEKQLVVRFRIDGVLKEVLKPNRKLSSLLVSRIKVMARLDIAEKRVPQDGRISLRIAGRAVDVRVSTMPSSHGERV VLRLLDKNTGNLDLEQLGMTDGIRVKFEDLIRRPHGIILVTGPTGSGKSTTLYAGLTEINSKDTNILTVEDPIEYELDGI GQTQVNTKADMTFARGLRAILRQDPDVVMIGEIRDLETAQIAVQASLTGHMVISTLHTNTASGAITRLQDMGVEPFLVSS SLLGVLAQRLIRTLCPKCKIEHVPDARERELLGIAADDDRRIFRANGCKSCGNNGYRGRTGIHELLLVDDNVRELIHGGR GELAIEKYIRQFVPSIRHDGMSKVLAGITTLEEVLRVTREE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-151 | 63 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-151 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sbal117_4374 | YP_006039521.1 | general secretory pathway protein E | VFG0182 | Protein | 4e-149 | 63 |
| Sbal117_4374 | YP_006039521.1 | general secretory pathway protein E | VFG2048 | Protein | 5e-151 | 62 |
| Sbal117_4374 | YP_006039521.1 | general secretory pathway protein E | VFG1876 | Protein | 3e-136 | 57 |
| Sbal117_4374 | YP_006039521.1 | general secretory pathway protein E | VFG2426 | Protein | 6e-78 | 47 |
