|
Name : Sbal117_4373 (Sbal117_4373) Accession : YP_006039520.1 Strain : Shewanella baltica OS117 Genome accession: NC_017579 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 5038831 - 5040054 bp Length : 1224 bp Strand : - Note : KEGG: shw:Sputw3181_3702 general secretion pathway protein F; TIGRFAM: General secretion pathway protein F; PFAM: Type II secretion system F domain DNA sequence : ATGCCAGCATTTGAATATAAGGCACTGGATGCCAAGGGAAAGCAGCTTAAGGGCGTAATCGAGGCGGATACCGCCAGACA CGCCCGTAGCCAGTTGCGCGATCAGCGCATGATGCCCTTGGAAATTCTGCCTGTTTCCGAAAAAGAAGCCAAAGCTAAGA GCAGCAGCTTTTCGTTTTTCAAACGGGGTATCTCGGTCGCTGAGTTAGCCTTGATCACCCGTCAAATCGCGACCTTAGTG GCCGCGGGTTTACCGATTGAAGAATCCCTTAAAGCCGTTGGTCAGCAATGCGAGAAAGATCGTCTTGCGAGTATGATCAT GGCGGTACGTTCGCGGGTGGTTGAAGGTTACAGTCTGGCCGACTCCTTGGCCGAATTTCCACACATTTTCGATGATTTAT ATCGTGCCATGGTGGCCTCGGGTGAAAAATCCGGTCACTTAGAAGTGGTGCTTAATCGGCTGGCGGATTACACAGAGCGA CGCCAACAGCTTAAATCTAAGTTGACTCAAGCCATGATTTATCCTGCGGTATTGACTACAGTGGCGATTGGGGTAATTTC CATCCTGCTGGCAGCGGTGGTGCCGAAAGTGGTTGGACAGTTTGAACACATGGGCGCCGAGTTACCGGCTTCGACACGCT TCTTGATTTCGGCCTCTGACTTTGTACAAAACTACGGTGTGTTTGTGGTTATCGCCCTAGTGATGCTGTTCGCACTCTTT CGCCGCATGTTAAAGTCGCCTGCGTTTCGAATGAAGTACGACAATTTTCTATTGAGCATGCCGGTTGTGGGCCGCGTGAG TAAGGGCTTAAATACGGCACGTTTTGCACGGACCTTAAGTATCTTATCCGCAAGCTCTGTGCCTTTGCTCGACGGTATGC GTATCGCCAGTGAAGTATTGCAGAATGTGCGAGTGCGGGCTGCAGTGGATGATGCGACTGCGCGGGTGCGTGAAGGAACT AGCTTAGGTGCGGCATTGACTAATACTAAGTTGTTTCCGGCAATGATGTTATACATGATTGCCTCGGGCGAAAAGAGTGG TCAGCTTGAGCAAATGTTAGAACGCGCCGCCGATAACCAAGACAGGGAATTCGAGGGTAACGTCAACATAGCATTAGGGG TGTTTGAGCCTATGCTGGTGGTGAGTATGGCGTGTGTGGTGCTGTTTATCGTGATGGCGATTCTGCAGCCAATCTTAGCC TTGAATAACTTGATTAGCGGTTAA Protein sequence : MPAFEYKALDAKGKQLKGVIEADTARHARSQLRDQRMMPLEILPVSEKEAKAKSSSFSFFKRGISVAELALITRQIATLV AAGLPIEESLKAVGQQCEKDRLASMIMAVRSRVVEGYSLADSLAEFPHIFDDLYRAMVASGEKSGHLEVVLNRLADYTER RQQLKSKLTQAMIYPAVLTTVAIGVISILLAAVVPKVVGQFEHMGAELPASTRFLISASDFVQNYGVFVVIALVMLFALF RRMLKSPAFRMKYDNFLLSMPVVGRVSKGLNTARFARTLSILSASSVPLLDGMRIASEVLQNVRVRAAVDDATARVREGT SLGAALTNTKLFPAMMLYMIASGEKSGQLEQMLERAADNQDREFEGNVNIALGVFEPMLVVSMACVVLFIVMAILQPILA LNNLISG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 5e-98 | 57 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-97 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sbal117_4373 | YP_006039520.1 | general secretion pathway protein F | VFG2049 | Protein | 6e-95 | 56 |
| Sbal117_4373 | YP_006039520.1 | general secretion pathway protein F | VFG0181 | Protein | 2e-87 | 49 |
| Sbal117_4373 | YP_006039520.1 | general secretion pathway protein F | VFG1870 | Protein | 1e-80 | 43 |
