Gene Information

Name : Sbal117_4158 (Sbal117_4158)
Accession : YP_006039307.1
Strain : Shewanella baltica OS117
Genome accession: NC_017579
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4788378 - 4789310 bp
Length : 933 bp
Strand : +
Note : TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Porphobilinogen deaminase; KEGG: son:SO_4313 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase

DNA sequence :
ATGTCTGAGAACCGCATACGTATCGCAACCCGCAAGAGTCCGCTGGCCATGTGGCAAGCTGAATTTGTTAAAGCCGAATT
AGAACGCATTCACCCAGGTATTGTGGTGGAATTGCTGCCAATGAGCACTAAAGGCGACGTTATCTTAGATACGCCGCTAG
CCAAAGTGGGCGGTAAAGGTTTGTTCGTCAAAGAGCTTGAAGTCGCTATGTTAGACGATCTTGCCGATATCGCCGTGCAC
TCAATGAAAGACGTGCCCGTCGACTTCCCAGAAGGCTTAGGCCTTGAAGTGATTTGCGAGCGCGAAGATCCCCGCGATGC
CTTTGTATCGAATTTATATAAATCGATCAGCGAATTACCATTAGGCGCAACTGTGGGCACCTCGAGCCTACGTCGTCAAT
GTCAGATACGTGCATCACGTCCCGACCTCATCATCAAAGATTTACGCGGTAACGTTGGAACTCGTTTAGCTAAGCTTGAT
AACGGCGAATACGATGCCATTATTCTTGCCGCTGCAGGCTTAATCCGTCTGAAATTGTCTGAGCGTATTGCCAGCTTTAT
TTCTGCCGAAGAATCCTTACCCGCCAACGGCCAAGGCGCTGTGGGTATCGAATGTCGCATCAACGACGAACGTGTTAAAG
CGCTACTGGCGCCATTAGAGCATTTAGAAACTCGCTACCGTGTTCTTGCCGAGCGCGCGATGAACACTCGCCTTGAAGGT
GGATGCCAAGTGCCGATTGGCGCATTTGCTGAAATCGATGGTGACGAGATGACGCTACGCGGCCTAGTCGGTAACCCAGA
TGGCAGTGAAATCATCGAAGGCGTGATCACAGGTCCAAAAACCGAAGCCACGCAATTAGGGGTTGCCCTTGCTGAAGAGT
TACTCAGCAAAGGTGCCAAAACCATTCTCGACGCCGTTTACGCTAAAGCCTAA

Protein sequence :
MSENRIRIATRKSPLAMWQAEFVKAELERIHPGIVVELLPMSTKGDVILDTPLAKVGGKGLFVKELEVAMLDDLADIAVH
SMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISELPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLD
NGEYDAIILAAAGLIRLKLSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRLEG
GCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKGAKTILDAVYAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-71 60
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-71 60